Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0419 ATGGAAGAACTATACTCTCTGCTTCATGGTCAAAGAAACATGGCACCAACCATGTTGTCCACTAAACAGTTATCAGCAATAATACCCCATCAACTAATGAATCCACAGAATATTGGAAGTTCTTCGATGAACAATTTGGCTTCTTTTTCATCCAAGAAATTATCTCATACCTCACCCGAATTACAGAAAATAGTAGACGAAAAATACATAGAAGAAAGTCTAATCCCATCCAAGGATGAGAATGATGATCGAAAACAACATGGAGGGCGTCGTAATTTGAATAAAATAATTCGCGGCAACAACAAGAGTATATATCTAGGAGTAATCATCTGCAACCAGCAGCGTTTCGAAGCATATGTGAGGGATAACTCCGATCCAGGGAAGAGAGGAAGAACAGGTGGTTATTATACTGAAGCTGACGCCGCCAGAGCTCATGATTTGGTGTCAATGAAGATTGGGGGCTTAAAAGCATTAACGAATTTTCCTGTGAGCTACTATTCGAACGAAATGGACGAAATGATAGGGATTAGCACAAAGGATTATATTTCTGCCATTAGATGGGGCAAGGACTATGGTGACGGTGACTCCCCTTACCGTGGCGTATACAGAAACAAGGTCCCAATACCAGGTGTGAGCAAGAATTGGGAAGCGAGGCTGGGTCACACTGCGGAGGATGCAGCTAGAGCTTTTGATATTATATCAATAAAAATCAAGGGAAGGGATGCCATAACCAATTTCGATTTGAACAGCTATGAAGTGGATGGAATTATGAGGTGTGAAGTCACAAGAGCAAGGGATGGAACGTTTGTTTTGAAGAGAGAAGGAACCAGCCATGATGGAACTCTACCTCAAAGCATGTCCATGGTGCAACACATTAATCCTCAAACCCACAATCTGATTTCAACCAACCCTTATGCTCTTGGTGGTGCTGGAAGTAGTGGCAGTACCTCAATTGTTAACCATGCAGCACAGTTTCCAAATCAGCTGAATGCTACAATGCAACCGCCACTTCAGACTCGGCAAACCCTACTGAATGTTAACAATGGTTTCAATCAGAATCTTCTCATCAACAACAACAACAACCAGTTGCAGCTGCCTCAGGGTTCTAACCGTATTGTGCTTCCTCATGGCCACCAAAATTGTGTTGGTTTCCCTAATTGGCCATCTGATTTTGGAAAAAAGTTGCTAGGGAGGAACTTCGAGTTATTGGAACCTTTAAGCAATACTAATAATGTCCTGAATGTGCAACCTCTTGCACAAGTCATGGTGAATGGATCAACTACTGGAGCAACAAATAATGGTGTTTCTTCATTTGAGAAACAAATCCAACCAGTGGAACCGTCTAATAAGGAAGTTGCGGCTACACCGCTACTGTTACCTGCACCGAACCAAAGTTCTGAGCCTCATAACATCCAAGCCAATAATACTACTTTGAACCAGATTTCACATGATCAGAATTCAAACTCCAGCAGCCTCTCTGATAGTTTTCAGGCTCCTGTTTCTGAACCAATGGACTTGGACATGAGAGATTATCTCAACAGATCTTACATAGAAGACAATGATTTTGCTTGTGATTTCGACATGTTTGGAGCAATGAATATTGGGGAAGAACGGTCACTCCAAAATCAAGGACCTGACCTGTCTTCAAGATATGATAGGAGTTTGTTTTGGAGAGTTTCTGTTGAACAAATGTTTTGGAGTTATAACTTTGATGTTTGA 1719 0.4154 MEELYSLLHGQRNMAPTMLSTKQLSAIIPHQLMNPQNIGSSSMNNLASFSSKKLSHTSPELQKIVDEKYIEESLIPSKDENDDRKQHGGRRNLNKIIRGNNKSIYLGVIICNQQRFEAYVRDNSDPGKRGRTGGYYTEADAARAHDLVSMKIGGLKALTNFPVSYYSNEMDEMIGISTKDYISAIRWGKDYGDGDSPYRGVYRNKVPIPGVSKNWEARLGHTAEDAARAFDIISIKIKGRDAITNFDLNSYEVDGIMRCEVTRARDGTFVLKREGTSHDGTLPQSMSMVQHINPQTHNLISTNPYALGGAGSSGSTSIVNHAAQFPNQLNATMQPPLQTRQTLLNVNNGFNQNLLINNNNNQLQLPQGSNRIVLPHGHQNCVGFPNWPSDFGKKLLGRNFELLEPLSNTNNVLNVQPLAQVMVNGSTTGATNNGVSSFEKQIQPVEPSNKEVAATPLLLPAPNQSSEPHNIQANNTTLNQISHDQNSNSSSLSDSFQAPVSEPMDLDMRDYLNRSYIEDNDFACDFDMFGAMNIGEERSLQNQGPDLSSRYDRSLFWRVSVEQMFWSYNFDV 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0419 572 Gene3D AP2/ERF domain 104 164 IPR036955 GO:0003700|GO:0006355
Aed4g0419 572 SUPERFAMILY DNA-binding domain 103 164 IPR016177 GO:0003677
Aed4g0419 572 ProSiteProfiles AP2/ERF domain profile. 104 162 IPR001471 GO:0003700|GO:0006355
Aed4g0419 572 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 68 316 - -
Aed4g0419 572 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL7 68 316 - -
Aed4g0419 572 SMART rav1_2 197 253 IPR001471 GO:0003700|GO:0006355
Aed4g0419 572 SMART rav1_2 104 168 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0419 Aed-Chr4 2984282 2988825 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0419 99 261 AP2-EREBP Transcription Factor Family AT5G57390 35.676 3.46e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0419 K09285 - pvu:PHAVU_001G137500g 337.421