Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0418 ATGTTTGGGTCCCTTCCACCACATCCTCAGAACACTATCACATGTGCACTTTCCCTCACCTGTGACCTTCAATTTGTTTTGACCCCGGAGAACAAGAAATGGGCAGCGAAGATCGATCGTGTGGGTCTGCCTTCCCTCAACTTGGGAACTTTTAAGAGTGCGGAGGAAGCAGCCAAAGCTCATGATATTGTGTCAATAAAATTGAAAGGCTTGGATGCTTCAATAAACTTCAATTTTCGAAATGAGTTTGGAAAAAAGCTGCTTGGTGGGAACTTGGAATTGGATCTTCCAAGAAATCCGAACGTGCAACCTCCAACACAAGGCGGCGTGGCGAATCCAAGTGCCGGAGCAACAAATGAAGCTGGTCCATTAGGGTTACAAATCCAACCAGTGGTTCCATCTAATCAGGATTTGGGACCTGCACTGAACCAAATTCAGGAACCTGGCAACAACAACAATGGTTCCCAGGCCCAATCCCAAGCCCCTGGAAGTTCAAATGATTGGGACATGAGCCAATATAGAAGAATATTAGAAGACCCAAATTTCAGCTTTGATCTTGACATGTTCGCACCAATGGGTGGTGATAAGAAAGGCCCCTAG 600 0.46 MFGSLPPHPQNTITCALSLTCDLQFVLTPENKKWAAKIDRVGLPSLNLGTFKSAEEAAKAHDIVSIKLKGLDASINFNFRNEFGKKLLGGNLELDLPRNPNVQPPTQGGVANPSAGATNEAGPLGLQIQPVVPSNQDLGPALNQIQEPGNNNNGSQAQSQAPGSSNDWDMSQYRRILEDPNFSFDLDMFAPMGGDKKGP 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0418 199 MobiDBLite consensus disorder prediction 130 168 - -
Aed4g0418 199 SUPERFAMILY DNA-binding domain 29 79 IPR016177 GO:0003677
Aed4g0418 199 SMART rav1_2 33 84 IPR001471 GO:0003700|GO:0006355
Aed4g0418 199 Gene3D AP2/ERF domain 26 80 IPR036955 GO:0003700|GO:0006355
Aed4g0418 199 ProSiteProfiles AP2/ERF domain profile. 22 78 IPR001471 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0418 30 92 AP2-EREBP Transcription Factor Family AT5G57390 43.750 1.92e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0418 - K09286 pvu:PHAVU_001G137500g 61.2326