Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0417 ATGGTTGATATGACTCAAACGGAGGTTGTTGATACTGTCAGAATGTTAAGTTTCTCCTTTGTGAGGCTCATGTCCATGTATCATGGAGTCATCAGAGATATCTCGTCTACTTTTAAATGGGAAGCAATAAGTTATGGTATAAGCAGCCTTGAAGAAAAATCCCTTGGATTATTCGACACAGAAGAGGAAGCAGCTAGGGCTTATGATGTTGAAAGCATAAGGTGGGGAGGGTACACCGCCATAACCAACTTCAATGTCAGGTTTTACAACGTTGAGGCCATTTTGAAAGGAGAGACTGATCATGAAAAAGTGATGTATCAGTTACAAAGCACTGTCCCTGTGGAAGCAATGGATCCTTTAGAAGTGCTTCAGAACATTATTGACCAAGGCTCCTTGAAAATGTTGTATGATACTATTACTGCTGCTGCTGCTGTAATGCAAACTTATGTGCAGGAATTTCAAAGGCCAATATCAGGAAACTACACAGAAGAAGAGGTAAATAATAATAATAATAATAATTATGTGCCCTTGGCCTCATCACAATTTAGTGCAATTGAGGGGCAATCTTTGGTCTATGAAAGTGTTGATCAGGGAAGCTCATACAACAGCATGTATTTTCAGGATGAGGGTGATGAATTGACCAGTTCTTATAAGAAGTTCATAAAGAAGAGTTAA 675 0.3896 MVDMTQTEVVDTVRMLSFSFVRLMSMYHGVIRDISSTFKWEAISYGISSLEEKSLGLFDTEEEAARAYDVESIRWGGYTAITNFNVRFYNVEAILKGETDHEKVMYQLQSTVPVEAMDPLEVLQNIIDQGSLKMLYDTITAAAAVMQTYVQEFQRPISGNYTEEEVNNNNNNNYVPLASSQFSAIEGQSLVYESVDQGSSYNSMYFQDEGDELTSSYKKFIKKS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0417 224 Gene3D AP2/ERF domain 26 87 IPR036955 GO:0003700|GO:0006355
Aed4g0417 224 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL7 1 171 - -
Aed4g0417 224 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 171 - -
Aed4g0417 224 ProSiteProfiles AP2/ERF domain profile. 26 85 IPR001471 GO:0003700|GO:0006355
Aed4g0417 224 SUPERFAMILY DNA-binding domain 25 87 IPR016177 GO:0003677
Aed4g0417 224 SMART rav1_2 26 91 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0417 Aed-Chr4 2978194 2979273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0417 1 99 AP2-EREBP Transcription Factor Family AT1G51190 41.414 8.67e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0417 - - gmx:102664631 232.646