Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0410 ATGCCAATGCCAATGCATCATCATCTTCTTCCCTTTGTCATTCTCATTCTCTTCTCTCTTGCTTCTCCGACAACCTCTCTGAACTCCGACGGCCTCTCCTTGCTGGGCCTCAAAGCCGCCGTGGACTCCGACCCCACCGGAGTTCTCACCTCCTGGTCGGAAAGCGACGCCACACCATGCCGCTGGCCGGGAGTGTCCTGCTCCGGCGACAAAGTGACCCAAATATCTCTCTCAAACAAAAACCTCACCGGTTACATCCCCTCCGAACTGGGTTTCTTAACCTCCCTTAAAAGACTAAGCTTTCCTTACAACAACTTCTCAAACGCGATTCCCCCATCTCTCTTCAACGCCACGTCACTCATCGTCCTAGACCTCTCTCATAACTCTCTCTCCGGTTCCCTCCCAACAGAGCTTCGCTCTCTCAAGTTCCTTCGCCATTTGGACTTATCCTCCAACTCTCTCAATGGTTCCATCCCCGAAACTCTCTCCGATCTCACCTCACTCGCCGGAACCCTCAATCTCTCGTTCAATCACTTCTCCGGCGGGATTCCGGCGTCCCTCGGGAACCTCCCCGTCGCCGTCAGCCTCGACCTCCGCCGCAACAACCTCACCGGAAAAATCCCTCAGGTGGGGTCCCTTCTGAACCAGGGCCCCACCGCGTTTTCCGGCAATCCTGGATTATGCGGGTTCCCGTTGCAGAGCGCGTGCCCCGAAGCGCAAAAGCCTGGAATTTTCGCGAACCCTGAAGACGGTTTCCCTGAGAACCCCAATGCGCTTCACCCTGAAGGGAATGGAGAGAGAGTGAAGCAGCACGGTGGCGGCTCCGTCGCTGTTCTCGTTATCTCCGGGCTTTCCGTCGCGGTTGGCGCGGTTTCGCTTTCGCTTTGGGTTTTCCGGCGACGGTGGGGCGGCGAGGAGGGGAAATTGGGAGGAGTTCAGAAATTGGAGGATAACGTTGATGCCGGAGAGGGGCAAGAGGGTAAATTTGTTGTCATGGATGAAGGGTTTGAGTTGGAGTTGGAGGATTTGCTCAGGGCTTCTGCGTATGTTGTTGGGAAGAGCAGGAGTGGGATTGTGTACAAGGTTGTCGGCGTCGGAAAAGGGTCCTCCGCTGCGGCGGCGAATGTGGTGGCTGTTCGGCGACTCAGCGAGGGCGATGCCACGTGGCGGTTCAAGGAGTTTGAGTCCGAGGTTGAGGCCATTGCCAGGGTTCGTCACACCAATGTTGTCCCTTTGAGAGCTTATTACTTTGCGCATGACGAGAAACTCATCATCACTGATTTCATTCGCAATGGAAGCTTGCACACTGCCTTACACGGTGGGCCTTCCAATTCATTGCCGCCATTATCATGGTCCACAAGGTTAACAATAGCTCAAGAAGCAGCAAGGGGCTTGATGTACATACACGAGTTCAGCGGCCGCAAGTATATCCATGGAAACATCAAGTCAACAAAAATCTTGCTGGACGACGAGCTCCATCCGTATGTGTCGGGTTTTGGACTCACTCGGCTCGGGTTGGGGCCAACAAAGTCTACTACAACAATACCAAAAAGGAACAGCTTGAACCAATCTTCTATTGTAGTGAGTTCAAAGACTGCAGCTTCCTTTAACCACTACTTGGCACCCGAGGTGCGCATTACCGGTGGCAAGTTCACTCAGAAATGTGATGTGTATTCTTTCGGTATAGTGCTGTTAGAACTTTTGACAGGTATGATGCCAGATTTTGGAGCAGAAAATGATGATGATGATAAGGTACTAGAGAGTTTTGTGAGGAAAGCATTCAAGGAGGAGCAGCCATTGTCTGATATCATAGACTCAGCACTTATCCCTGAAGTTTATGCTAAAAAGCAAGTCATTGCTGCATTCCATATTGCTCTCAATTGCACGGAACTTGATCCAGAGTTGCGACCTAGGATGAAAACTGTGTCGGAAAGCCTTGATCACATCTAA 1950 0.5205 MPMPMHHHLLPFVILILFSLASPTTSLNSDGLSLLGLKAAVDSDPTGVLTSWSESDATPCRWPGVSCSGDKVTQISLSNKNLTGYIPSELGFLTSLKRLSFPYNNFSNAIPPSLFNATSLIVLDLSHNSLSGSLPTELRSLKFLRHLDLSSNSLNGSIPETLSDLTSLAGTLNLSFNHFSGGIPASLGNLPVAVSLDLRRNNLTGKIPQVGSLLNQGPTAFSGNPGLCGFPLQSACPEAQKPGIFANPEDGFPENPNALHPEGNGERVKQHGGGSVAVLVISGLSVAVGAVSLSLWVFRRRWGGEEGKLGGVQKLEDNVDAGEGQEGKFVVMDEGFELELEDLLRASAYVVGKSRSGIVYKVVGVGKGSSAAAANVVAVRRLSEGDATWRFKEFESEVEAIARVRHTNVVPLRAYYFAHDEKLIITDFIRNGSLHTALHGGPSNSLPPLSWSTRLTIAQEAARGLMYIHEFSGRKYIHGNIKSTKILLDDELHPYVSGFGLTRLGLGPTKSTTTIPKRNSLNQSSIVVSSKTAASFNHYLAPEVRITGGKFTQKCDVYSFGIVLLELLTGMMPDFGAENDDDDKVLESFVRKAFKEEQPLSDIIDSALIPEVYAKKQVIAAFHIALNCTELDPELRPRMKTVSESLDHI 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0410 649 SUPERFAMILY Protein kinase-like (PK-like) 350 645 IPR011009 -
Aed4g0410 649 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Aed4g0410 649 Gene3D Phosphorylase Kinase; domain 1 325 428 - -
Aed4g0410 649 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 649 - -
Aed4g0410 649 ProSiteProfiles Protein kinase domain profile. 345 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0410 649 SUPERFAMILY L domain-like 33 233 - -
Aed4g0410 649 Gene3D Ribonuclease Inhibitor 27 170 IPR032675 -
Aed4g0410 649 Gene3D Ribonuclease Inhibitor 171 238 IPR032675 -
Aed4g0410 649 Gene3D Transferase(Phosphotransferase) domain 1 429 649 - -
Aed4g0410 649 Pfam Protein tyrosine and serine/threonine kinase 351 646 IPR001245 GO:0004672|GO:0006468
Aed4g0410 649 PRINTS Leucine-rich repeat signature 120 133 - -
Aed4g0410 649 PRINTS Leucine-rich repeat signature 141 154 - -
Aed4g0410 649 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Aed4g0410 649 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 13 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0410 Aed-Chr4 2914129 2918556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0410 27 649 Receptor kinase-like Gene Family AT3G57830 58.842 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed4g0410 PK_Tyr_Ser-Thr 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0410 - - gmx:100778816 1116.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0410 4 2914129 2918556 Aed4g0410 4 2914129 2918556 ECH