Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0406 ATGTTCTTCTCCTCCTTCATAGCTTTGGTTATTTTCTCTTTACTTTTCAAGTCCCTTATCAGAAAGAGAAGCACCACCACAAGTTTTCGACCACCACCAAGTCCACCAGCACTTCCAATAATCGGGCACCTCCACCATGTTGGTTCAGTGGTACCAAAATCATTCCAAGCCCTGGCTCGCCTCTATGGCCCTCTCATTCAGCTCCGTTTGGGTGCCTCCACGTGTGTAATTGTCTCCAACGCCCAAGTTGCCAAAGAAGTGATGAAAACGAATGATCTCAATTTCTGTTACCGACCCCACTTTGGATCCTCAGAGTACTTCTTATACAAAGGCTCTGGTTTCGTCACTGCCCCGTATGGCCCCTATTGGCGCTTCATGAAGAAGCTTTGCGTGACTCAGCTTCTCTCCTCCTCGCAGCTCGGGCGTGCAAGCTTCGTGCACGTTCGAGAGCAGGAGATAGAGAAGCTGTTGAAATCTGTTATGACCACTTCCACTCAAGGTGGGGCCACGGATTTGAGCTTCGAGCTCACTGCTTTGACGAATAATGTTCTGTGTCGGATGGCTATGAGCACTAGCTGTTTGGACAGGGTTCATGATGCTAACGAGATTCTTGGCTTGGTCAGGGAGTTTCTGAATTCGGGGGCTAAGTTGAGCATGGGTGAGGTGTTGGGACCTTTGGGAAAGTTTGACCTTTTTGGCCATGGGAAGAACCTTGTCAAAATAGTTGACAAATTTGATAAGCTTTTGGAGCGTATATTAGAGGAACATGAAGAGGCACGTCGAGGTGAAACAGGGGACATGATGGATATTCTGTTGCAAGTCTACAATGATCCAAATGCTGAAGTGAGGTTAACAAGAAATGATATCAAGGCCTTCTTCCTAGATATTTTTCTGGCGGGAACGGACACGTCATCAGCGGCGTTGCAATGGGCGATGGCGGAGATCATGAACAACCCGGGAGTGTTAAAAAGGGTGAAGGAAGAGATTGATGCAGTGGTGGGGACTAACAGGTTGGTCAAGGAATCAGACATTCCAAATCTACGTTATCTCCAAGCTGTTGTGAAGGAAGTTAAGAGACTCCATCCAACGGCGCCGTTTGCTCTAAGACAAGCAGCAGAGGATTGCAGCATCAACGGCTACGATATAAAGGGCCAGACACGGACACTTATCAATGTCTACGCCATCATGCGGGACCCAGAAGCGTGGCCCAACCCGGAGGAGTTTATACCAGAGAGGTTCTTGGAAGCCACTGATGATGATGAACGTATGTTTACAATGAACGGTGGCGATTTCAGGTATCTTCCGTTTGGGTTTGGCAGGAGGGGGTGTCCTGGAGCTTCCCTTGCCTTAACGGTCATACAAGTCACGGTTGCATCTCTGATTCAATGTTTTGAATGGAAAGTCAAAGGCGGAGAGAGGGTTTGTATGGAAGAAGGCTCATCGTTTTCTACAGGATTGGCAAAGCCTCTTGTTTGTTACCCTGTCACTCGTTTTAATCCTTTTTAA 1506 0.4774 MFFSSFIALVIFSLLFKSLIRKRSTTTSFRPPPSPPALPIIGHLHHVGSVVPKSFQALARLYGPLIQLRLGASTCVIVSNAQVAKEVMKTNDLNFCYRPHFGSSEYFLYKGSGFVTAPYGPYWRFMKKLCVTQLLSSSQLGRASFVHVREQEIEKLLKSVMTTSTQGGATDLSFELTALTNNVLCRMAMSTSCLDRVHDANEILGLVREFLNSGAKLSMGEVLGPLGKFDLFGHGKNLVKIVDKFDKLLERILEEHEEARRGETGDMMDILLQVYNDPNAEVRLTRNDIKAFFLDIFLAGTDTSSAALQWAMAEIMNNPGVLKRVKEEIDAVVGTNRLVKESDIPNLRYLQAVVKEVKRLHPTAPFALRQAAEDCSINGYDIKGQTRTLINVYAIMRDPEAWPNPEEFIPERFLEATDDDERMFTMNGGDFRYLPFGFGRRGCPGASLALTVIQVTVASLIQCFEWKVKGGERVCMEEGSSFSTGLAKPLVCYPVTRFNPF 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0406 501 Pfam Cytochrome P450 32 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0406 501 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0406 501 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0406 501 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0406 501 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0406 501 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0406 501 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0406 501 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0406 501 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0406 501 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0406 501 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0406 501 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0406 501 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0406 501 SUPERFAMILY Cytochrome P450 28 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0406 501 Gene3D Cytochrome P450 18 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0406 501 PANTHER CYTOCHROME P450, FAMILY 712, SUBFAMILY A, POLYPEPTIDE 1 2 501 - -
Aed4g0406 501 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 2 501 - -
Aed4g0406 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0406 Aed-Chr4 2893552 2895490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0406 15 501 Cytochrome P450 AT2G42250 52.642 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0406 - - gmx:106794180 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0406 4 2893552 2895490 Aed4g0406 4 2893552 2895490 ECH
Aed8g1427 8 18900999 18904788 Aed4g0406 4 2893552 2895490 PCT