Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0405 ATGGCTGATTACCAAGGCTACATCATGCTTTTCCTCACATGGCTAGTCTCCACTATAGTGGTTCGAGCCATACTCAACAGAAAACGAAACAAGACTAATAAACCACCGAGTCCACTAGCCTTACCCATCATTGGACATCTCCATCTTCTTGCTCCAATACCTCACCAAGCACTTCACAAACTCTCCACCCGCTATGGACCCATAATGCACCTTCTCCTCGGTTCTGTTCCTTGCGTGGTAGCTTCCACACCAGAAGCTGCAAGAGAATTCCTCAAAACCCACGAAACCTCGTTCTCAAACCGCCCCCAAAGTTCTGCAGTTGATTATCTAACGTATGGGTCCCAAGACTTCTCTTTTGCCCCATATGGACCTTATTGGAAGTTCATGAAGAAAATATGCATGTCTGAACTTCTGGGGGGTCACACGCTGAGTCAGCTTCTTCCCGTGAGGAGACAAGAGACGTTAAGGTTCATGAGGCTTCTGCTCCAGAAAGGGAATTCAGGTGAGGCCATTGATGTTGGGAGAGAACTACTTAGACTCTCGAACAACGTTGTTTCGAGGATGATTATGAGCCAAACGTGTTCTGAAGATGATGGTGAGGCCGAAGAGGTGAGGAAGTTGGTGCAAGACACTGTGCATCTCACGGGGAAGTTTAATGTTTCGGACTTCATTTGGTTCCTTAGGAACTGGGACTTGCAGGGGTTTGGAAAGGGACTCAAGGAGATTCGGGACAGGTTTGATACGATGATGGAGAGGATCATCAAGGAGCATGAAGAGGACAGAAAGAAAAGAAAGGAAGTGGGTACTGGAGGAGAAGGAGATGGTCAAATCAAGGATCTGCTTGATGTATTGTTGGACATACATGAAGATGAGAACTCTGACATTAAATTGACAAAAGAGAACATTAAGGCCTTCATCTTGGATATATTTATGGCAGGAACAGACACTGCAGCCTTGACAACAGAATGGGCTCTGGCTGAGTTGATTAACCACCCACATATAATGGAGAGAGCAAGAGAAGAGATTGATGCTGTGATAGGAGATGGTAGAATAGTAGAAGAATCAGACATTGTGAACCTTCCTTACCTGCAAGCTATAGTCAAAGAAACGCTGAGGATTCACCCCACAGGTCCAATGATTGTTAGAGAGTCATCAGAAAGGTGCACTATCTGGGGCTATGAGATTCCAGCAAAGACTCAGTTGTTTGTGAATGTGTGGGCTATTGGAAGGGACCCCAATCACTGGGAGAATCCACTTGAGTTCAGACCAGAGAGGTTTGTTAGTGAAGAGGGTCAGTTAGATGTGAGGGGACAACATTTTCATTTGATTCCATTTGGGAGTGGGAGAAGAGGGTGCCCTGGAACCTCACTGGCTTTGCAGGTTGTGCAGGCCAACCTTGCTGCTATGATTCAGTGCTTTGAATGGAAGCTTAAAGGAGGAGCCAATGACACTGCTGACATGGAAGAGAAACCTGGGATAACTCTTTCGAGGGCTCATCCATTGATATGTGTCCCACTACCTAGGCTTAATGCTTTTCCTAATATGTGA 1548 0.4593 MADYQGYIMLFLTWLVSTIVVRAILNRKRNKTNKPPSPLALPIIGHLHLLAPIPHQALHKLSTRYGPIMHLLLGSVPCVVASTPEAAREFLKTHETSFSNRPQSSAVDYLTYGSQDFSFAPYGPYWKFMKKICMSELLGGHTLSQLLPVRRQETLRFMRLLLQKGNSGEAIDVGRELLRLSNNVVSRMIMSQTCSEDDGEAEEVRKLVQDTVHLTGKFNVSDFIWFLRNWDLQGFGKGLKEIRDRFDTMMERIIKEHEEDRKKRKEVGTGGEGDGQIKDLLDVLLDIHEDENSDIKLTKENIKAFILDIFMAGTDTAALTTEWALAELINHPHIMERAREEIDAVIGDGRIVEESDIVNLPYLQAIVKETLRIHPTGPMIVRESSERCTIWGYEIPAKTQLFVNVWAIGRDPNHWENPLEFRPERFVSEEGQLDVRGQHFHLIPFGSGRRGCPGTSLALQVVQANLAAMIQCFEWKLKGGANDTADMEEKPGITLSRAHPLICVPLPRLNAFPNM 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0405 515 Gene3D Cytochrome P450 19 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0405 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Aed4g0405 515 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0405 515 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0405 515 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0405 515 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0405 515 SUPERFAMILY Cytochrome P450 35 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0405 515 Pfam Cytochrome P450 35 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0405 515 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 513 - -
Aed4g0405 515 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 513 - -
Aed4g0405 515 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0405 515 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0405 515 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0405 515 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0405 515 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0405 515 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0405 515 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0405 515 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0405 515 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0405 Aed-Chr4 2890650 2892761 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0405 1 508 Cytochrome P450 AT5G06900 50.784 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0405 K24188 - gmx:100779342 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0405 4 2890650 2892761 Aed4g0405 4 2890650 2892761 ECH
Aed4g0405 4 2890650 2892761 Aed8g1426 8 18889462 18893169 PCT
Aed8g1428 8 18923312 18927873 Aed4g0405 4 2890650 2892761 PCT