Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0404 ATGAATGCTTCATATTTTCCCATCTTAATCTTAATTAATTTCCTAAGAATCTATCTCCTATTACCCTTCGTCTCTGGTCTATTTGCCAAACTCCTCAGCTCGCCAAAAGAAGAAAATCGAGCCAGTGCAATTAAAGATCTGAAGTTAACTAAGGATGTCTATTTAGTATTAGTTTGTTTATTTCTATTCTATCACATAATCAAGTCTCAAGGTATGGCTTTTCAAGTGTTGCTCATATGTTTGATATCCACCATCGTGTTTGCATCCATAATACTATGGAGAAAACAGAACAAAAACAAGAGCCTCCTTCTTCCACCGGGTCCAATGGCCCTACCCATCATCGGCCACCTCCACCTTCTTTCCCCTAACCCTCACCAAGATTTTCACAAGCTCTCTACAATCTACGGACCCATAATACACATTTTTCTCGGTTCAGTCCCATGCGTGGTGGCTTCCACCGCAGAAGTCGCGAAAGAGTTCCTCAAAACACACGAAGCCGCCTTCTCGAACCGCCCCGCCAACACCGTCGCCGTGGAGGCCTTAACCTACGGCTTCCAAGACTTCACTTTCGCACCCTACGGACCCTACTGGAAGTTCATGAAGAAGCTCTGCATGTCCGAGCTTCTCGGTGCCCACATGCTGAACCGGTTCCTTCCCCTGAGGCAGCAAGAGACAAAGAGATTCGTCGCGCGCGTCCTCCGCAAAGGCGTCGCCGGCGAGGCCGTGGACTTCCGGGGAGAGTTCATCACGCATTCCAACAACGTCGTTTCGAGAATGATCGTGAGTCGGACGAGCGCTGAGGACGAGAGCGAGGTTGAGGAGATGAGGAAGCTGGTGGCGGATGCTGCAGAGCTCGTGGGGAAGTTTAATGTTTCGGACTTCGTTTTGTTCTTGAAGCGTTTTGATTTGCAGGGGTTCAACAAGAGGCTGGAGAATATTCGGAACAGGTTTGACACCGTGCTGGACAGAATCATAAAGCAGCGTGAAGAGGAAAGAAACAACAACGGTGGAACACGTCAGTTTAAGGATATGCTTGATGTTTTGTTTGACATAGCTGAAGATGAGAGTTCTGAAATCAAATTAAACAAAGAGAACATTAAGGCCTTCATCTTTGACATACTAGTTGCTGGGACTGACACTACAGCTTTAACTGTGGAATGGGCTGTGGCAGAGTTAATCAACAATCCACGTGTGTTGGAGAGGGCAAGGCAAGAGATAGATGCAGTTGTTGGAAAGAGTAGAATAGTAGAAGAATCAGATATGGTCAACCTTCCTTACCTTCAAGCTATTGTTAGAGAAACATTAAGGATGCACCCAGCTGGTCCGTTACTTTTTAGAGAGTCATCAAAAAGTGTTGTCGTTTGTGGGTATGATATTCCAGCCAAGACTCGATTATTTATCAATGTTTGGGCTATTGGTAGGGACCCCAATTACTGGGAGAACCCTCTTGAGTTTAGACCAGAAAGGTTTATTGAAAATAGGAAGAGTCAATTGGATGTTAGGGGACAACATTATCATCTACTTCCATTTGGCAGTGGAAGAAGAGCATGTCCTGGTACTTCTTTGGCATTGCAGGTTTTGCATGTGAATCTGGCTGTTATGGCTCAGTGTTTCCAATGGAAGGTTGATGGTGGCAATGACAAGGTGGACATGGAAGAGAAATCTGGCATCACTCTTCCGAGGGCTCACCGCATAATTTGTGTCCCTGTTCCAAGGCTTAACCCATTCCCTTTTGTGTGA 1740 0.458 MNASYFPILILINFLRIYLLLPFVSGLFAKLLSSPKEENRASAIKDLKLTKDVYLVLVCLFLFYHIIKSQGMAFQVLLICLISTIVFASIILWRKQNKNKSLLLPPGPMALPIIGHLHLLSPNPHQDFHKLSTIYGPIIHIFLGSVPCVVASTAEVAKEFLKTHEAAFSNRPANTVAVEALTYGFQDFTFAPYGPYWKFMKKLCMSELLGAHMLNRFLPLRQQETKRFVARVLRKGVAGEAVDFRGEFITHSNNVVSRMIVSRTSAEDESEVEEMRKLVADAAELVGKFNVSDFVLFLKRFDLQGFNKRLENIRNRFDTVLDRIIKQREEERNNNGGTRQFKDMLDVLFDIAEDESSEIKLNKENIKAFIFDILVAGTDTTALTVEWAVAELINNPRVLERARQEIDAVVGKSRIVEESDMVNLPYLQAIVRETLRMHPAGPLLFRESSKSVVVCGYDIPAKTRLFINVWAIGRDPNYWENPLEFRPERFIENRKSQLDVRGQHYHLLPFGSGRRACPGTSLALQVLHVNLAVMAQCFQWKVDGGNDKVDMEEKSGITLPRAHRIICVPVPRLNPFPFV 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0404 579 Pfam Cytochrome P450 105 567 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0404 579 SUPERFAMILY Cytochrome P450 105 572 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0404 579 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 74 577 - -
Aed4g0404 579 PANTHER CYTOCHROME P450 FAMILY PROTEIN 74 577 - -
Aed4g0404 579 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 510 519 IPR017972 GO:0005506|GO:0016705
Aed4g0404 579 Gene3D Cytochrome P450 89 568 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0404 579 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0404 579 PRINTS P450 superfamily signature 517 528 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0404 579 PRINTS P450 superfamily signature 376 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0404 579 PRINTS P450 superfamily signature 508 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0404 579 PRINTS E-class P450 group I signature 385 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0404 579 PRINTS E-class P450 group I signature 365 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0404 579 PRINTS E-class P450 group I signature 428 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0404 579 PRINTS E-class P450 group I signature 507 517 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0404 579 PRINTS E-class P450 group I signature 517 540 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0404 579 PRINTS E-class P450 group I signature 468 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0404 579 PRINTS E-class P450 group I signature 156 177 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0404 579 PRINTS E-class P450 group I signature 132 151 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0404 Aed-Chr4 2887226 2889477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0404 76 572 Cytochrome P450 AT5G06900 47.400 5.27e-169 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0404 K24188 - gmx:100815706 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0404 4 2887226 2889477 Aed4g0404 4 2887226 2889477 ECH
Aed4g0404 4 2887226 2889477 Aed8g1428 8 18923312 18927873 PCT