Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0393 ATGGCAGGAACTGGTTTCTCCACCTCCTGTCTTTCCTCTTCCAGCAACTTAGGAACATGTTGGTTGGAATTAAAAACTCACAATGCAAGGGCCGTGCCAGGGAAACTACTTGGAACTAGTGGAAGGAGAAGATTAGCATTAATAAAAGCAGAAGTGAAGTATGTGAACGCTGATAAAGCTAAGGAACTTGTGGAAGCTGATGGATACACTGTTCTTGATGTGCGGGACAAATCTCAGTTTGAGCGAGCTCACATCAAATCTTCTTCTCATGTGCCTCTTTTTGTTGAGAACAAAGACAATGATCCCGGTACTATTATAAAAAGGCAGCTGCACAATAATTTTTCTGGGTTGTTCTATGGGTTACCATTCACTAAGCCAAATCCTGAATTTGTACAATCTGTTAAGAGCCAGTTTCCACCTGAAAGTAAACTCTTGGTTGTATGTCAAGAAGGGCTGAGGTCTGCTGCAGCAGCAAGTAAGTTAGAGGAGGCTGGTTTCGAAAATATAGCATGCATAACATCTGGCCTTCAAGCTGTAAAACCAGGGACTTTTGATTCTGTTGGGTCCACGGAGTTGGAGAATGCTGGCAAAGCTGGTTTGGTGACAATCCAAGGAAAAATCTCAACTGTGTTGGGAACTATTCTTGTTTGTGCATATTTATTCGTTACCTTCTTCCCTGACCAAGCAGAGAAGCTATTCCAATTGGCCCCTACAGGCTAA 720 0.4278 MAGTGFSTSCLSSSSNLGTCWLELKTHNARAVPGKLLGTSGRRRLALIKAEVKYVNADKAKELVEADGYTVLDVRDKSQFERAHIKSSSHVPLFVENKDNDPGTIIKRQLHNNFSGLFYGLPFTKPNPEFVQSVKSQFPPESKLLVVCQEGLRSAAAASKLEEAGFENIACITSGLQAVKPGTFDSVGSTELENAGKAGLVTIQGKISTVLGTILVCAYLFVTFFPDQAEKLFQLAPTG 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0393 239 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 42 178 IPR036873 -
Aed4g0393 239 ProSiteProfiles Rhodanese domain profile. 65 188 IPR001763 -
Aed4g0393 239 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 1 238 IPR044615 -
Aed4g0393 239 CDD RHOD 60 180 - -
Aed4g0393 239 Pfam Rhodanese-like domain 57 179 IPR001763 -
Aed4g0393 239 Gene3D - 42 183 IPR036873 -
Aed4g0393 239 SMART rhod_4 55 185 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0393 Aed-Chr4 2818420 2821355 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0393 7 233 Sulfurtransferasese or Rhodanese AT2G42220 67.841 1.70e-113 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0393 - - gmx:100500055 439.113