Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0388 ATGTTGTTCCTCTTTCGAAAACTGATCCTCCTTAAACCCTGGCAAAACCCTAGTAGATTCCACAGCACCAAATTCGCCGTAAAAGAAGCCCAAGACGCACTGCTCGAGTACCTCCACTCCACGCGCAGCCTCAGCATCGTAGACGCCGACAACATGTGCCGAAACTCACCCTCATTCCTCCACGACCTCCTTCTCAAAACACAATCCCAAACACCAACCCAAGCGCGCCACGTGGACAACACGAAACGCTCCATCTCGCGCTACCTCCGGTACCACCCCATCAACGAATTCGAACCCTTCTTTGAGAGCGCCGGCCTCACCCCTCCCGAATACGCGCCACTCCTCCCGCGTCACATGATTTACCTCAACGATGACGTTCTGCTCATGGAGAATTACCACACCCTCTGCAACTACGGCGTTCCCCGCACCAACATGGGCACGCTTTTCAAACTAACCCCTCAGATCTTCCGTTATCAGCACGGGGTTTTAATCTCCAAGCTTCGAGATTACGAAAATCTGGGTGTTTCACCGTTTACGTTGGCGCGTGTGGTTGCTTCTAGCCCCTGCATTTTGGTTGGGGAAGTTGATTTTGATTTCGTTAGGGTTTTGGAGAAGTTGAAGGGTATTGTTGGAAAGGACGGTGATTGGGTCGCGGAGAATCTGTTGAGTGATCAGGGTTGTTGTTGTTGTAATTGGGGGATAGTGCTTCATGTTTTGACTTTGCTTGCTAGGGTTTACAGTGAGGAACAGTTGGGTGATTTTATCACTCGTCACCCTAGTGTTGTTTTTGAGGAGTCTGGGGCTAGTGTCTTGTCTCTGATTAACTTTTTGTTCAAATTCGGGCTGTCTATGAACCAGGTTTCGCTTGTGCTTCTCGAGTTTCCAAAGATTCGGGTTGCGAGGTTTTTGTTGAACTTGAGGCAGTGTTGTCTGTTCTTGACTGAGATTGAGATGGAGGCTTCAGAGATTGGGAGGATTCTGCAGTCTCACTGCTTGGTGTTGGGTTCCTTCACTTTGAAGAAGACGATTACTTTGCTTACTAACTTGAATGCTGGCAAGCAGCGGCTGTGTAGAGTTGTGAGGGATGATCCTCTGGTAATGAAGAGTTGGGCTTTGGGAAGGAAGATTGAGCCTTTGGTGAACTCGTATTTAGAGTACGAATCGAAGGAGCAGAAGAAGAAGTTCATGCTGGAGTTGGGGTATGTGGAGAACTCGAAGAAAATGAATGAGACGATTAAGCTGTTCAGAGGTAAGGGAGCTGAGCTTCAGGAGAGACTTGATTTTATTGTTAAGGCTGGGTTGGATTATGAGGTTGTCTGTAAGATGATTCGAGATTCTCCGCGGATTCTCAATCAGACGACGGATAGGATCAACATGAAAATTGAGAATCTTGTGAGTTTAGGATATTCTATATCGGATTTAACGAGTTTTCCTTCCTTTCTTTCTTATTCGCCTCGAAGAGTTAAGCTGAGGTTTTCAATGTATAATTGGCTCAAGGAGCATGGAGCTGCAGAAGCAGGGCTTGCTTTGAGCACTATAATTGCATGCTCTGATAAAGCGTTTGAGAAGCTCCAATTCAATATCAGACATGTTAGCAGGCATCATGAGAATTCAAGATGGCATTCACATGAAACAATCATAGACAACTAA 1650 0.4655 MLFLFRKLILLKPWQNPSRFHSTKFAVKEAQDALLEYLHSTRSLSIVDADNMCRNSPSFLHDLLLKTQSQTPTQARHVDNTKRSISRYLRYHPINEFEPFFESAGLTPPEYAPLLPRHMIYLNDDVLLMENYHTLCNYGVPRTNMGTLFKLTPQIFRYQHGVLISKLRDYENLGVSPFTLARVVASSPCILVGEVDFDFVRVLEKLKGIVGKDGDWVAENLLSDQGCCCCNWGIVLHVLTLLARVYSEEQLGDFITRHPSVVFEESGASVLSLINFLFKFGLSMNQVSLVLLEFPKIRVARFLLNLRQCCLFLTEIEMEASEIGRILQSHCLVLGSFTLKKTITLLTNLNAGKQRLCRVVRDDPLVMKSWALGRKIEPLVNSYLEYESKEQKKKFMLELGYVENSKKMNETIKLFRGKGAELQERLDFIVKAGLDYEVVCKMIRDSPRILNQTTDRINMKIENLVSLGYSISDLTSFPSFLSYSPRRVKLRFSMYNWLKEHGAAEAGLALSTIIACSDKAFEKLQFNIRHVSRHHENSRWHSHETIIDN 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0388 549 SMART mt_12 181 213 IPR003690 GO:0003690|GO:0006355
Aed4g0388 549 SMART mt_12 146 176 IPR003690 GO:0003690|GO:0006355
Aed4g0388 549 SMART mt_12 440 470 IPR003690 GO:0003690|GO:0006355
Aed4g0388 549 SMART mt_12 471 504 IPR003690 GO:0003690|GO:0006355
Aed4g0388 549 Pfam mTERF 247 383 IPR003690 GO:0003690|GO:0006355
Aed4g0388 549 Pfam mTERF 419 522 IPR003690 GO:0003690|GO:0006355
Aed4g0388 549 Gene3D Transcription termination factor 3, mitochondrial 268 530 IPR038538 -
Aed4g0388 549 Gene3D Transcription termination factor 3, mitochondrial 60 266 IPR038538 -
Aed4g0388 549 PANTHER CGI-12 PROTEIN-RELATED 19 530 IPR003690 GO:0003690|GO:0006355
Aed4g0388 549 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 19 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0388 Aed-Chr4 2770077 2772055 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aed4g0388 mTERF 1.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0388 - - gmx:100807690 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0388 4 2770077 2772055 Aed4g0388 4 2770077 2772055 ECH