LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed4g0383	ATGAGCCAGAAGAGCTCCGAGAACGACAACCAGGCTGAGGAGATGAAGAAGCTGGTGTCGGACATCGCGGAACTCATGGGGAAGTTCAATGTTTCCGATTTCATTTGGTACTTGAAGCCTTTTGATTTGCAGGGGTTCAACAACAAAATCAAGGAAACAAGGGACAGGTTTGACGTCGTGGTGGACAGAATCATAAAGCAGCGTCAAGAAGAGATATGGAAGAACAAAGAAACCGGCGGAACACGTGAGTTTAAGGACATGCTTGATGTTTTATTGGACATACTCGAAGATGAGAATTCTGAAATCAAATTAGACAAAAGGAACATTAAGGCCTTCATCATGGACATATTTGTTGCTGGGACTGACACGTCAGCTGTAAGCATAGAATGGGCTATGTCAGAACTAATAAACAACCCAGATGTGTTGGAGAAGGCGAGACAAGAGATAGATAGTGTGGTTGGAAAAAGTAGAATGGTGGAAGAATCAGATATTGGCAACCTTCCTTACTTGCAAGCCATTGTTAGAGAAACACTTAGGCTTCACCCTGGTGGTCCATTGGTTGTTAGAGAGTCATCAAAAAGTGTTGTGGTTTGTGGGTATGATATTCCAGCAAAGACTCGATTATTTGTCAATGTTTGGGCTATTGGTAGGGACCCCAATCACTGGGAGAACCCTTTTGAGTTTAGGCCAGAGAGGTTTATCAAAGATGGGCAGAAACAGTTGGATGTTAGGGGACAGCATTATCATTTTATTCCGTTTGGGAGTGGAAGAAGAACGTGCCCTGGTGCTTCTCTTGCGTGGCAGGTTGTGCCGGTGAATCTGGCAGTTATGGCTCAGTGTTTCCAATGGAAGCTTGTTGGTGGCAATCACAAGGTGGACATGGAAGAGAAGTCTGGCATCACTCTTCCCAGGGCTAACCCCATAGTTTGTGTTCCTGTTCCAAGGCTTAATCCATTCCCTATTATGTGA	969	0.4458	MSQKSSENDNQAEEMKKLVSDIAELMGKFNVSDFIWYLKPFDLQGFNNKIKETRDRFDVVVDRIIKQRQEEIWKNKETGGTREFKDMLDVLLDILEDENSEIKLDKRNIKAFIMDIFVAGTDTSAVSIEWAMSELINNPDVLEKARQEIDSVVGKSRMVEESDIGNLPYLQAIVRETLRLHPGGPLVVRESSKSVVVCGYDIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFIKDGQKQLDVRGQHYHFIPFGSGRRTCPGASLAWQVVPVNLAVMAQCFQWKLVGGNHKVDMEEKSGITLPRANPIVCVPVPRLNPFPIM	322

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed4g0383	322	SUPERFAMILY	Cytochrome P450	6	315	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed4g0383	322	PRINTS	P450 superfamily signature	119	136	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed4g0383	322	PRINTS	P450 superfamily signature	172	183	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed4g0383	322	PRINTS	P450 superfamily signature	260	271	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed4g0383	322	PRINTS	P450 superfamily signature	251	260	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed4g0383	322	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	253	262	IPR017972	GO:0005506\|GO:0016705
	Aed4g0383	322	PRINTS	E-class P450 group I signature	171	189	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed4g0383	322	PRINTS	E-class P450 group I signature	211	235	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed4g0383	322	PRINTS	E-class P450 group I signature	260	283	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed4g0383	322	PRINTS	E-class P450 group I signature	128	154	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed4g0383	Aed-Chr4	2751091	2752343	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed4g0383	3	315	Cytochrome P450	AT5G06900	51.118	8.53e-114	337

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed4g0383	K24188		K13261	gmx:100776878	602.053

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