Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0379 ATGACCGAGCTGAAACGCGAATTGGTCAATGATGACGATGATGACGATAGCAGCAGCAGCAGCTTCGACGGCGACGATTACCAGACTCCGAAAGGCCGTCGAGGTATTCGTTCTCGGTACCTCGCCGTCACAAACATGATTCATGATGAAAGGGAAGAAATTGCGAGGCCTGACTCTCACAAGTTTGATTTGATCTTTAATGAAATGGAGAACTTACATCATCTAGTTACAAAACCAAGAGAACAAGTAGCTGATGCAAAGGCTCTTTTGGATATTACCCAATCCTTGGCAATGTCTGTGAAAACTGTTGCCAATGGTGAACTAACTCCTAAAGATTTTGTCACCCACATTCTTAAAAAATTCGGAGGAAAAGGTGGACCAAGTAATAGCACTGAAGATTGCAGCAGCAGAAACTCAATAGCTTGGAAGGATATTGGAGTTGTAGTGTCACGTGTTTTTAGAGCGGGTCGTGGGTGCTATACAATAGGTAACAATTACCTGCTGAGTGGTGGTTCAGGGGAAGAGAGAACTGAGACTGATAAACATATGTTATCCATGTTTAACATCTTAAGGGTTAATAAAGTTGTCAGGCTTGAGAATCTGATTTTGAATCGGAACTCATTTGCACAAACGGTGGAGAATCTATTTGCTTTATCTTTTTTAGTCCGGGATGGACGGGCTGAAATAAAAGTGAACGAGGCTGGATGGCAACTAGTCTCGCCAAGGAATGCTCCTGCTGCAAATTCAGTTCTTTCCAGGGATGTTGCTTTCAGCCACTTTGTATTCCGATTTGACTTCAATGATTGGAAGCTGATGGTTCGATCTGTTGGGGTTGGTGAGGAGCTGATGCCTCATAGAGATAGCCAATCACAGAGTCAGAGTGCAGTATTTGCAGAGCCTCGTAAAAAAAAGCCTAGAACAACAAAAGTGTAG 933 0.4319 MTELKRELVNDDDDDDSSSSSFDGDDYQTPKGRRGIRSRYLAVTNMIHDEREEIARPDSHKFDLIFNEMENLHHLVTKPREQVADAKALLDITQSLAMSVKTVANGELTPKDFVTHILKKFGGKGGPSNSTEDCSSRNSIAWKDIGVVVSRVFRAGRGCYTIGNNYLLSGGSGEERTETDKHMLSMFNILRVNKVVRLENLILNRNSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANSVLSRDVAFSHFVFRFDFNDWKLMVRSVGVGEELMPHRDSQSQSQSAVFAEPRKKKPRTTKV 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0379 310 PANTHER UNCHARACTERIZED 1 162 IPR027786 GO:0005634|GO:0006281|GO:0030915
Aed4g0379 310 PANTHER UNCHARACTERIZED 168 307 IPR027786 GO:0005634|GO:0006281|GO:0030915
Aed4g0379 310 MobiDBLite consensus disorder prediction 1 33 - -
Aed4g0379 310 Pfam Nse4 C-terminal 196 283 IPR014854 -
Aed4g0379 310 MobiDBLite consensus disorder prediction 284 310 - -
Aed4g0379 310 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 1 162 - -
Aed4g0379 310 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 168 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0379 Aed-Chr4 2727246 2729984 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0379 33 299 Non-SMC Element family AT3G20760 45.364 3.85e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0379 K22825 - gmx:100781485 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0379 4 2727246 2729984 Aed4g0379 4 2727246 2729984 ECH