Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0375 ATGGGAATGGAGCGAGTGCAGTGTGCCTATGCCTCTCTGGACGAAGCGTTCAAAATTGGGAAAGAGACGTATAAGGGTCAGCAATACAGCCAGATTTACTTCGCGCGCCTTCATTTGATGCGAACTTTCTTGTATTCCCTCGTTCCCAATTGGAAACCCAATTTTCCCGTATGCACGGTTCTGGGATTGGAAGATGGCAAAGAGTGTGTCATTGTTGGAACCCTCTATAAACACATGAAGCTCAAACCTTGCATTCTGGATGAGTATTCTAAGGAGAGATCAATGGCTCCACTTGTCAAGCCACATAACTTCACGCACCCGGATGATCACCTAGTTTTGGAAGATGAAAGCGGGAGGGTTAAGCTCGGTGGGAATATCATTTTGCCATCGGAATATGTAACAGGAATTGTGGTTGCTTTACTTGGAAAGGAAATTGGGGCAGGTTACTTTTTGGTTCAGGATGTCCTAGATGCTGGCTTACCACCACAGATAGAATTCCCCCTTAAATCAAGGGAAGACAAATATGTTGTTCTTGTGTCAGGGTTAAGTGTTGGGAGCAGCAGCTCAAATCCTCTTCAGTTTCAGCTTCTCATTGATCATATTACAGGGCATTTAGGAGATGAGAAGGAGCAAAGTATTGCATCACAAATTGTTCAAGTTGTCTTTGCTGGAAATTTAGTCGAGATACCTCGCATACTTCTTAATGGACAGAATTTGGCTTCAAAGGACCTCTCAAGGATGGCTGAACCAATAAAGGAGCTAGATATTTTGTTGAGTCAGATAGCTGCTGGTTTGCCTGTGGATATCATGCCAGGACTCAGTGACCCTGCTAATTTCTCATTACCACAGCAGTCATTGCATAGATGCCTTTTCCCTGGGTCGTCGGTATACAATACTTTTAGATCTTGTACAAATCCTCATTGTTTTCAGCTTGATAATGTCAGGTTTCTTGGGACATCGGGTCAAAATGTAGATGATCTTGAGAAGTATTCAGAGGCAAAAGATAAACTTGAATTCATGGAAAGGACATTAAGATGGAGGCATTTGGCACCCACTGCACCTAGTACTCTTGGATGCTATCCTTATACTGATAAGGACCCTTTCTTCATTGAGAGCTGCCCTCATGTTTACTTTGTTGGAAATCAAGATAAATTTGAAACTCGTGTCATAAAGGTCCCTCAATTCTTTCTGTTGGAACGAGAGCGCCACGATGCTGCTGCGGTTGTGCCTTCAGTTCAGTCATCACCAGCTCCAGACATGGCAGAAAAGAAGCGGAAGGAGAGGGATGAAGTCAAAGAAGAAGAAGAAGCCAAACACTCAACAGAAGAGGAGGGGGAGTTGTTTGCCCTCATCGTTGCAAAAACAGCTTGA 1371 0.4376 MGMERVQCAYASLDEAFKIGKETYKGQQYSQIYFARLHLMRTFLYSLVPNWKPNFPVCTVLGLEDGKECVIVGTLYKHMKLKPCILDEYSKERSMAPLVKPHNFTHPDDHLVLEDESGRVKLGGNIILPSEYVTGIVVALLGKEIGAGYFLVQDVLDAGLPPQIEFPLKSREDKYVVLVSGLSVGSSSSNPLQFQLLIDHITGHLGDEKEQSIASQIVQVVFAGNLVEIPRILLNGQNLASKDLSRMAEPIKELDILLSQIAAGLPVDIMPGLSDPANFSLPQQSLHRCLFPGSSVYNTFRSCTNPHCFQLDNVRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPSTLGCYPYTDKDPFFIESCPHVYFVGNQDKFETRVIKVPQFFLLERERHDAAAVVPSVQSSPAPDMAEKKRKERDEVKEEEEAKHSTEEEGELFALIVAKTA 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0375 456 Gene3D - 34 158 - -
Aed4g0375 456 Coils Coil 424 444 - -
Aed4g0375 456 Gene3D - 167 426 - -
Aed4g0375 456 MobiDBLite consensus disorder prediction 419 445 - -
Aed4g0375 456 MobiDBLite consensus disorder prediction 407 445 - -
Aed4g0375 456 Pfam DNA polymerase alpha/epsilon subunit B 176 386 IPR007185 GO:0003677|GO:0006260
Aed4g0375 456 Pfam DNA polymerase delta subunit OB-fold domain 28 155 IPR040663 -
Aed4g0375 456 CDD MPP_PolD2_C 190 394 IPR041863 -
Aed4g0375 456 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 4 392 IPR024826 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0375 4 391 Core DNA Replication Machinery Family AT2G42120 76.031 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0375 K02328 - gmx:100780072 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0375 4 2702400 2709164 Aed4g0375 4 2702400 2709164 ECH