Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0371 ATGTTTTCGTGGCTTGCAAGAATAGTTTCGTCGTGCTTGAGGCCTATGAGGCGCTATGTTCGCATGAACAAAGATGGTGATGATGATGATGTTGATGAATCCTCTTCCGTTGAAGACTCTCTTCTGTGGCGTAGAGACCTTGAGAAGCATTCTTGTGGTGAATTCTCCTTCGCTGTGGTTCAGGCCAATGAAGTTATTGAAGATCATAGCCAAGTTGAGATTGGCTCTGATGCCATCTTTGTTGGGGTTTATGATGGCCATGGGGGTCCTGAAGCTTCACGGTTCGTCAGAGATCACCTCTTCCAGCACCTAATGAGGATTACTCGGGATAATGGAACTATCTCTGAAGAAATTCTCAGAGGTGCTGTTTCTGCTACAGAGGATGGGTTTCTGAAACTTGTTCATAGGAGTTATATGATAAAGCCTTTGATTGCATCAATTGGTTCCTGTTGTCTGGTTGGTGTTATCTGGAAAGGGACTCTATATGTCGCCAATGTTGGAGACTCCCGTGCCGTTATTGGTTCTATAGGTAGATCTAACAAGATCATTGCCGAGCAGTTGACTAGAGAGCACAATGCTAGCAGGGAGGAGATTAGACAAGAACTCAAGTCTTTGCATCCTCAAGATTCACAAATTGTAGTAATGAATCGTGGAACATGGCGCGTTAAAGGCATCATCCAGGTATCCAGATCCATAGGAGATGCATATTTGAAGCGGCCACAGTTCTCTCTCGATCCATCATTCCCGCGGTTCCACTTGTCTGAACCTATAACCAAACCTGTGCTAACAGCAGAACCATCTCTATGTTCAAGAGTTTTGCAGCCCCATGACAAATTCCTTATATTTGCATCTGATGGACTTTGGGAACACATGACAAATCAGCAAGCAGCCGAGATTGTTCATAAGAATCCACGAAATGGGGTTGCAAGAAAACTTATTAAGACTGCTCTAAAGGAGGCTGCTAACAAAAGGAAAATGAAGTATAAAGAGCTTCAGAAGATTGAGAAAGGGAACAGAAGGATTTTTCATGATGATATCACTGTGATTGTTGTCTTCATAGACCATGAGTTGCTTGGGAAGAAAGTTACTGCTCCAGAGTTGTCCATCAGAGGGTTCATTGACTCGGATGGACCATCAAATTTTAAAAGTGTCCAAGAGTTTATGTGA 1167 0.4319 MFSWLARIVSSCLRPMRRYVRMNKDGDDDDVDESSSVEDSLLWRRDLEKHSCGEFSFAVVQANEVIEDHSQVEIGSDAIFVGVYDGHGGPEASRFVRDHLFQHLMRITRDNGTISEEILRGAVSATEDGFLKLVHRSYMIKPLIASIGSCCLVGVIWKGTLYVANVGDSRAVIGSIGRSNKIIAEQLTREHNASREEIRQELKSLHPQDSQIVVMNRGTWRVKGIIQVSRSIGDAYLKRPQFSLDPSFPRFHLSEPITKPVLTAEPSLCSRVLQPHDKFLIFASDGLWEHMTNQQAAEIVHKNPRNGVARKLIKTALKEAANKRKMKYKELQKIEKGNRRIFHDDITVIVVFIDHELLGKKVTAPELSIRGFIDSDGPSNFKSVQEFM 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0371 388 ProSitePatterns PPM-type phosphatase domain signature. 80 88 IPR000222 GO:0043169
Aed4g0371 388 ProSiteProfiles PPM-type phosphatase domain profile. 54 353 IPR001932 -
Aed4g0371 388 Coils Coil 184 204 - -
Aed4g0371 388 SMART PP2C_4 48 351 IPR001932 -
Aed4g0371 388 Pfam Protein phosphatase 2C 75 321 IPR001932 -
Aed4g0371 388 Gene3D - 31 362 IPR036457 -
Aed4g0371 388 SUPERFAMILY PP2C-like 60 354 IPR036457 -
Aed4g0371 388 PANTHER ALPHABET, ISOFORM E-RELATED 6 373 - -
Aed4g0371 388 CDD PP2Cc 55 353 IPR001932 -
Aed4g0371 388 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 6 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0371 Aed-Chr4 2690518 2694879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0371 1 381 PP2C-type Phosphatase Gene Family AT5G06750 68.299 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0371 K01102 - gmx:100806476 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0371 4 2690518 2694879 Aed8g1463 8 19560995 19566232 PCT