Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0363 ATGCATTTGCTAAAACCAGATTTTGGAAAAGAAGCCAAAAACATGTTTTCTTTTCCTCAATATTCCCTATTCATGATCAGCACCATTTTCTTAGTGCTAGCAATCTTTGTTCATCCATCAAATGCTCAACTGAGTTCAAGCTTCTACTCCAGCACCTGCCCCAACGTGTCTTCCATTGTGCGCAGTGCTGTTCAGCAGGCTCTGCAATCTGATCCTCGTATAGCTGCGAGCCTAATTCGTCTTCATTTCCATGATTGCTTTGTTAATGGAGGAGGTCCTTCATGGAACGTACTACTAGGAAGAAGGGATGGTTTGATTGCAAACCAATCTGGTGCGAACACATCCATTCCCAATCCAACTGAAAGCTTGGCCAATCTCACTGCAAAATTTGCTGCCGTTGGCCTTAACATAACTGATCTCGTTGCATTATCTGGTGCACACAGTTTTGGTCGTGCGCAATGTAGATTTTTCAACCAGAGACTCTTCAACTTCAGTGGCACGGGAAGCCCCGATCCGACTCTGAACGCAACCTATTTAGCCACACTGCAGCAAAACTGTCCACAAAATGGAAACGGGAACACTCTGAACAACCTCGATCCTTCGACCCCAGACACCTTTGACAACAACTACTTCCAGAACCTTCTCAGCAATCAGGGACTTCTCCAAACAGACCAAGAGCTCTTTTCCACTAACGGCGCCGCCACGATCTCCATTGTCAACAACTTCGCCGTCAACCAAACGGCGTTCTTCGAAGCCTTTGTTCTGTCCATTATCAACATGGGTAACATTAGCCCGTTAACTGGAAGCCAGGGTGAAATCAGAATCGATTGTAAGAAAGTCAATGGGAGTTAA 852 0.4554 MHLLKPDFGKEAKNMFSFPQYSLFMISTIFLVLAIFVHPSNAQLSSSFYSSTCPNVSSIVRSAVQQALQSDPRIAASLIRLHFHDCFVNGGGPSWNVLLGRRDGLIANQSGANTSIPNPTESLANLTAKFAAVGLNITDLVALSGAHSFGRAQCRFFNQRLFNFSGTGSPDPTLNATYLATLQQNCPQNGNGNTLNNLDPSTPDTFDNNYFQNLLSNQGLLQTDQELFSTNGAATISIVNNFAVNQTAFFEAFVLSIINMGNISPLTGSQGEIRIDCKKVNGS 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0363 283 Gene3D - 91 281 - -
Aed4g0363 283 PANTHER PEROXIDASE 72-RELATED 18 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0363 283 PANTHER PEROXIDASE 72-RELATED 89 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0363 283 CDD secretory_peroxidase 43 280 IPR033905 GO:0004601|GO:0042744
Aed4g0363 283 Gene3D Peroxidase, domain 2 117 260 - -
Aed4g0363 283 PRINTS Haem peroxidase superfamily signature 135 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g0363 283 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g0363 283 PRINTS Haem peroxidase superfamily signature 75 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g0363 283 PANTHER PEROXIDASE 89 282 - -
Aed4g0363 283 ProSiteProfiles Plant heme peroxidase family profile. 43 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g0363 283 PRINTS Plant peroxidase signature 77 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0363 283 PRINTS Plant peroxidase signature 53 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0363 283 PRINTS Plant peroxidase signature 225 237 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g0363 283 ProSitePatterns Peroxidases active site signature. 75 86 IPR019794 GO:0004601
Aed4g0363 283 Gene3D - 44 90 - -
Aed4g0363 283 PANTHER PEROXIDASE 18 90 - -
Aed4g0363 283 ProSitePatterns Peroxidases proximal heme-ligand signature. 139 149 IPR019793 -
Aed4g0363 283 Pfam Peroxidase 91 243 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g0363 283 SUPERFAMILY Heme-dependent peroxidases 43 281 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0363 Aed-Chr4 2641645 2643128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0363 23 90 Peroxidase AT5G06720 70.588 2.09e-24 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0363 K00430 - gmx:100783115 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0363 4 2641645 2643128 Aed4g0363 4 2641645 2643128 ECH
Aed4g0363 4 2641645 2643128 Aed8g1478 8 19792456 19795222 PCT