Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0345 ATGGACAACATTAACACTGATCAGAGAGAGACCCACGACTTCATGAACGTCGATTCTTTCTCTCAGCTCCCCTTCCTCCGCCCCGCACCGCCGCCCTCCAAAGAAAAAGCCATCCGCCTCTTCGGCCATGAATTCATCGACGTGCCCCCCGACAACAACGTTAACTCTTCCGAACATAATAATACCAACAAAGACAACAACGTAGAAAACGGCGAAAACAGCCGCAGGTTCGAGTGCCATTACTGTTGTCGAAACTTCCCCACTTCCCAGGCCTTAGGCGGCCACCAAAACGCGCACAAGAGAGAGCGCCAGCACGCGAAACGACACCTTCAAACCACCCTCTCCGACGCCAACAACACGTACGGCTTCATGAACATGAACTACAGGTTCGGTTCCACGGCAGTGTCGTCGTCTAATTACTCTTACTCTTCTTACTATCCAACGTGGAATAGTTCCAACAGTGGTGGAACTGGAAGGTTCTACGGAAGCTCCAGCTCCTCTTATTCTCAACCCATCAACGGAAGCCCCTTGGGTTTATGGCGAATCCCCAGCCCCACCACCACTACTGCCACTCCATATTCCCAAAGTAACCCTATTTTCAACCGCGAATTACGCTCGATGCATCCTTTGCCTTTGCTTTCTGGCGAGGAAATGGTGAACGCGAGGATGGGGCACTCTGCTGCTTCGCAAAACGGGTTTGGTGGTAATTATGACCACAAACCCAGCGTAAACGACCATGTGAGTTTGGATCTTCATCTGTAA 762 0.5118 MDNINTDQRETHDFMNVDSFSQLPFLRPAPPPSKEKAIRLFGHEFIDVPPDNNVNSSEHNNTNKDNNVENGENSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRHLQTTLSDANNTYGFMNMNYRFGSTAVSSSNYSYSSYYPTWNSSNSGGTGRFYGSSSSSYSQPINGSPLGLWRIPSPTTTTATPYSQSNPIFNRELRSMHPLPLLSGEEMVNARMGHSAASQNGFGGNYDHKPSVNDHVSLDLHL 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0345 253 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 104 IPR013087 -
Aed4g0345 253 PANTHER ZINC FINGER PROTEIN GIS 1 253 - -
Aed4g0345 253 Pfam C2H2-type zinc finger 76 101 - -
Aed4g0345 253 ProSitePatterns Zinc finger C2H2 type domain signature. 79 99 IPR013087 -
Aed4g0345 253 PANTHER ZINC FINGER PROTEIN GIS 1 253 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Aed4g0345 253 MobiDBLite consensus disorder prediction 49 70 - -
Aed4g0345 253 SUPERFAMILY beta-beta-alpha zinc fingers 74 105 IPR036236 -
Aed4g0345 253 MobiDBLite consensus disorder prediction 50 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0345 Aed-Chr4 2485929 2486690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0345 1 253 C2H2 Transcription Factor Family AT2G41940 40.816 2.81e-45 150
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0345 4 2485929 2486690 Aed4g0345 4 2485929 2486690 ECH
Aed4g0345 4 2485929 2486690 Aed8g1491 8 20067804 20068715 PCT