Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0327 ATGAAGGACGAGGTGGTGGATTCCCCTGTTGGTGTTCTTGAGGACTATTTCAAGAGTTCAGAATCAGAAACAAGTTCTTCCAAAGAACCCACTTTGGATTCTGATAAGTCAAAACCTGGTTCTAGGTGGCATGCGTTTCTTCAATTGCTGAGGGTCAAATCGAAGAAGCCAATAGCCACATTGCACCCTCTCAGTGTCCTCAAGCTTTCAAGAAGAATGAGCAGTAGCATGAGGGAGACTATAATAGATGCAGATTCGTCCTTGCACAGGTCACCCTGGAAGATCTTCACTCACCATGAGATACAAATTGCAACCAATTACTTCGCCCAAGAAAATTTTATTGGAAAGGGTGGTTATGCTGAGGTTTACAAGGGGTGTTTGCCAAATGGTAAGCTGGTAGCGATTAAACGGCTGACACGTGGAACAGAAAATGAAACAATAGGGGACTTCTTATCAGAACTTGGCATAATGGCTCATGTAAACCACCCCAATACTGCTAAGTTAGTTGGCTATGGAGTGGATGGAGGAATGCATTTAGTGCTTCAGTTGTCTGAAAAAGGGTGCTTAGCTTCAGTACTTAACGGTTCCAACAAGGAGAAACTACCATGGTCTATTAGGCAGAAAATAGCATTAGGAACAGCTAAGGGTATAATGTATCTTCATGAAGGTTGTCAAAGAAGAATTATCCATAGAGATATAACAGCAGCAAATATCTTACTTACTGAGGAATTTGAGCCGCAGATTTGTGATTTCGGGCTAGCGAAATGGCTTCCAGAGAATTGGACCCATCACACAGTTTCAAAAATTGAAGGGACTTTTGGTTATCTTGCTCCTGAATACTTGCTTCATGGGATAGTGGATGAGAAAACAGATGTATTTGCGTTTGGTGTTGTGCTCTTAGAATTAGTCACAGGGCGGCGAGCACTTGATCATTCACAACAAAGCCTTGTTTTGTGGGTTGTACAGCTTTTGAATGGTAACCTTAGCTGCTTTAAGTTCACGAAGAAATCTCAACTTCCATTCTTCCGAAAAGTCTTTCAAGAAGAGTTCCTTGATTCTGATTAA 1065 0.4169 MKDEVVDSPVGVLEDYFKSSESETSSSKEPTLDSDKSKPGSRWHAFLQLLRVKSKKPIATLHPLSVLKLSRRMSSSMRETIIDADSSLHRSPWKIFTHHEIQIATNYFAQENFIGKGGYAEVYKGCLPNGKLVAIKRLTRGTENETIGDFLSELGIMAHVNHPNTAKLVGYGVDGGMHLVLQLSEKGCLASVLNGSNKEKLPWSIRQKIALGTAKGIMYLHEGCQRRIIHRDITAANILLTEEFEPQICDFGLAKWLPENWTHHTVSKIEGTFGYLAPEYLLHGIVDEKTDVFAFGVVLLELVTGRRALDHSQQSLVLWVVQLLNGNLSCFKFTKKSQLPFFRKVFQEEFLDSD 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0327 354 Gene3D Phosphorylase Kinase; domain 1 79 182 - -
Aed4g0327 354 ProSitePatterns Protein kinases ATP-binding region signature. 114 136 IPR017441 GO:0005524
Aed4g0327 354 MobiDBLite consensus disorder prediction 16 40 - -
Aed4g0327 354 PANTHER OS08G0249100 PROTEIN 5 320 - -
Aed4g0327 354 Pfam Protein tyrosine and serine/threonine kinase 111 320 IPR001245 GO:0004672|GO:0006468
Aed4g0327 354 Gene3D Transferase(Phosphotransferase) domain 1 185 347 - -
Aed4g0327 354 ProSiteProfiles Protein kinase domain profile. 108 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0327 354 ProSitePatterns Tyrosine protein kinases specific active-site signature. 228 240 IPR008266 GO:0004672|GO:0006468
Aed4g0327 354 PANTHER PROTEIN KINASE FAMILY PROTEIN 5 320 - -
Aed4g0327 354 SUPERFAMILY Protein kinase-like (PK-like) 88 329 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0327 Aed-Chr4 2346282 2348650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0327 85 335 Trihelix Transcription Factor Family AT1G70460 42.969 4.33e-58 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aed4g0327 PK_Tyr_Ser-Thr 7.3e-40 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0327 4 2346282 2348650 Aed8g0776 8 6621416 6625443 PCT