Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0326 ATGTCCATCTATTTCTACATCTTCTCTATCCTTTTTCTGACCTTAACTTTCCCATCCCCTTCACTGGGAGCAAACGACACCACTACCACCGGCGCTTCATGTCCCCTGAACATCACCGTCCTCCGCGTGGTGGGCAGAGGCGGCCGCCCCTCCCTGGACTCCGGCACGGCGTGCCAATACATCCTGCGAGCACTCCACCTCCTCCAATCAGACTACCTCCGCCGCAGCAAACGGTTCGTTCCGCCGCTGAACTCATCGGAGTCATGCTGGAACACCCTGGAGTCCTTCATAAACGAGTTCGAGCCAAGCTTCAACATCCGCGCCTCCTGCGGCTTCAAAACCGAATGGATCTCCCAGGGCTGCATGAACATCACCACCTTAGAGCAGTTCACAAACACTGTTCCCAACGCCGCAATCCAATCCGTGGAAGCAAACTGCAACCAATCGCTCGATAACAACTCCCCCTGCGCCCTCTGCACAACCAAAATCTCCAGCATGCTATCCTACTTAACAGGACCCGCCGTCAGGAACGTCACCGACTGCAGAGCCTACACTCAAATCTACGCCGCTTCTCTCTCCGACCAATACGGACCCACTGATCCCGGAACTGCTAAGTGCCTCTTCGGCCTCGACTTTTCCTCCTCCGACTCCGGCGGTAAGCGCCGAACAATTGTTATAGCTGTTGTTTCTGTTTTCTGTGTCTTAGCTTTGGTTGTGTTTGTTGGCCTTTGGGTTTACTTGAGATTCAAGAAGAGGAGGGAGCTTCAGAGAGGAAAGGGTGCCGGAGCTACTGAGCAAGCTTTGGCTTCTGGCTTGGATTCCATGAACCATAGTACCACTTTGATTAGGTTCACTTTCGATGACATTAAGAAATCCACAAGGAACTTCTCAAGAGACAACATAATTGGAAGTGGGGGTTATGGGAATGTTTACAAAGGCATGCTCCTGGATGGCACCCAAGTTGCCTTCAAAAGGTTCAAGAATTGTTCCGTTGCCGGGGATGCCAGCTTCACTCACGAGGTTGAGGTTATCGCCAGTGTTCGCCATGTGAATCTTGTTACCTTGAGAGATGGCATTCCAGAGCCTGGTCCACCGGAAGTTCTTGAAAAGTATGTGCTTGTTGCTGTGTTGTGTTCTCATCCACAGCTATATGCTAGGCCAACAATGGATCAGGTTGTTAAAATGCTTGAGACTGATGAATCGGTTCCATCGTTGATGGAAAGGCCAATTCCCTTTATTTCTGGAAGGCTTGATATTGAGAAATCTGCTCTGAGTAACTCGGGTCAGCTCTGCAGTCCAACTGGTTATCAAGCATATACATTGCAAGCTCGACGCAAATCTAATACTAAGGAGGGGGAGGAGGAGGAAGAGGAAGAAGAAGAAGAAGAGGGAAGTTCTGTTGCTGATACTGTCACCACAGATGGAAATTGGGGAAGTTGA 1440 0.5035 MSIYFYIFSILFLTLTFPSPSLGANDTTTTGASCPLNITVLRVVGRGGRPSLDSGTACQYILRALHLLQSDYLRRSKRFVPPLNSSESCWNTLESFINEFEPSFNIRASCGFKTEWISQGCMNITTLEQFTNTVPNAAIQSVEANCNQSLDNNSPCALCTTKISSMLSYLTGPAVRNVTDCRAYTQIYAASLSDQYGPTDPGTAKCLFGLDFSSSDSGGKRRTIVIAVVSVFCVLALVVFVGLWVYLRFKKRRELQRGKGAGATEQALASGLDSMNHSTTLIRFTFDDIKKSTRNFSRDNIIGSGGYGNVYKGMLLDGTQVAFKRFKNCSVAGDASFTHEVEVIASVRHVNLVTLRDGIPEPGPPEVLEKYVLVAVLCSHPQLYARPTMDQVVKMLETDESVPSLMERPIPFISGRLDIEKSALSNSGQLCSPTGYQAYTLQARRKSNTKEGEEEEEEEEEEEGSSVADTVTTDGNWGS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0326 479 Coils Coil 443 463 - -
Aed4g0326 479 Gene3D Phosphorylase Kinase; domain 1 261 358 - -
Aed4g0326 479 SUPERFAMILY Protein kinase-like (PK-like) 273 371 IPR011009 -
Aed4g0326 479 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 357 449 - -
Aed4g0326 479 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 22 357 - -
Aed4g0326 479 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Aed4g0326 479 PANTHER OS01G0253100 PROTEIN 22 357 IPR045271 GO:0004714|GO:0006468
Aed4g0326 479 Pfam SPARK 31 178 IPR043891 -
Aed4g0326 479 MobiDBLite consensus disorder prediction 442 479 - -
Aed4g0326 479 PANTHER OS01G0253100 PROTEIN 357 449 IPR045271 GO:0004714|GO:0006468
Aed4g0326 479 MobiDBLite consensus disorder prediction 453 467 - -
Aed4g0326 479 ProSiteProfiles Protein kinase domain profile. 296 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0326 Aed-Chr4 2339863 2341824 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0326 352 441 Receptor kinase-like Gene Family AT2G48010 62.366 3.05e-27 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Aed4g0326 SPARK 6.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0326 - - gmx:100819453 533.102