Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0325 ATGCCACCACTCTTTGTGTTCCTTGTGACCACCATCTTCCTCACACTTCCAACCCTCTCCCTCTCGGTCGAGTGTCCCCTGAACGTGACGCTCCTCCGTTCAAGACCCTCCCACGCCACGCGCTGCCAGTACTTCATCAAAGCCCTCCGTTTTCTCGAATCCGACCACCTCCGGCGCACCGGTTCATTCTTCCCTCCTTCAAACACCTACTCCTCCTGCTGGAACTCTCTCCAATTCTTCGTCAACCAATACGACATTCGCTCCTCTTGCAACATCCCTTCCTCTTACATCTCCCTCTCATGCACCAACATCACCACCCGAACCCAGTTCCAAAATTTCCTTCCTAACTCTACTCTTAAACCCGTGTGGACCAGTTGCAACCAGTCTCTTCAGACTTCCTTAGCTTGTTCTCGCTGCAAAAATGCTTTGTCCAACTTGGATTCTTCCCTCACGGAACAATCATCAACTTTCGAACTCGATGATTGCAAGGAAATTGCTTCCATTTATGCCGCTTCCTTCTCCAATCTTCAAGACTCCGGAACCGCTAAGTGTTTGTTCAACCTCGATTTTTCCACTTCTGCTTCCAGTGGTAAGCGTCCAAACATTCTTGTTCTGGTTTTTTCTATCTTGGCCTTCTTCTTTCTGCTCTTTGGTGCTTTGTGGGCTTACTTTAGATTCAAGCAGAAGAAGAGAGATACTGGTCTAATTGAGATGGGTTTGGATTCCATGAACAATAGTACCACTTTGATTAGGTTCACTTTTGATGACATTAAAAGGGCTACTAGGAATTTCGCCGCTGACAACATAATTGGGAAGGGGGGTTATGGGAATGTTTATAAAGGTGTGCTCTTTGATGGGACTCAAGTTGCATTGAAAAGGTTCAAGAATTGTTCTGTTGCTGGGGATGCTAACTTCACTCATGAGGTTGAGGTTATTGCAAGTGTTAGGCATGTTAACCTTGTTGCCTTAAGAGAACTTGGTCCAATTGAAGTTCTTGAGAAGTATGTGTTGGTTGCTGTACTATGTTGTCATCCACAACTGTATGCTAGGCCAACAATGGATCAGGTTGTTAAAATGCTTGAGACAGAAAAATTGGAACAGGCAATCTCTTCTTCTATTGCTAGGGACTGCAGAGCTGATCCAACCGGTTAG 1152 0.4566 MPPLFVFLVTTIFLTLPTLSLSVECPLNVTLLRSRPSHATRCQYFIKALRFLESDHLRRTGSFFPPSNTYSSCWNSLQFFVNQYDIRSSCNIPSSYISLSCTNITTRTQFQNFLPNSTLKPVWTSCNQSLQTSLACSRCKNALSNLDSSLTEQSSTFELDDCKEIASIYAASFSNLQDSGTAKCLFNLDFSTSASSGKRPNILVLVFSILAFFFLLFGALWAYFRFKQKKRDTGLIEMGLDSMNNSTTLIRFTFDDIKRATRNFAADNIIGKGGYGNVYKGVLFDGTQVALKRFKNCSVAGDANFTHEVEVIASVRHVNLVALRELGPIEVLEKYVLVAVLCCHPQLYARPTMDQVVKMLETEKLEQAISSSIARDCRADPTG 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0325 383 ProSiteProfiles Protein kinase domain profile. 264 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0325 383 Pfam Protein tyrosine and serine/threonine kinase 267 348 IPR001245 GO:0004672|GO:0006468
Aed4g0325 383 SUPERFAMILY Protein kinase-like (PK-like) 244 325 IPR011009 -
Aed4g0325 383 ProSitePatterns Protein kinases ATP-binding region signature. 270 292 IPR017441 GO:0005524
Aed4g0325 383 PANTHER OS01G0750732 PROTEIN 20 324 - -
Aed4g0325 383 PANTHER OS01G0750732 PROTEIN 323 366 - -
Aed4g0325 383 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKF3-RELATED 20 324 - -
Aed4g0325 383 Gene3D Phosphorylase Kinase; domain 1 227 335 - -
Aed4g0325 383 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKF3-RELATED 323 366 - -
Aed4g0325 383 Pfam SPARK 23 154 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0325 Aed-Chr4 2334656 2336341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0325 322 365 Receptor kinase-like Gene Family AT2G48010 72.727 1.08e-14 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Aed4g0325 PK_Tyr_Ser-Thr 8.3e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0325 - - gmx:100819980 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0325 4 2334656 2336341 Aed8g0777 8 6631909 6633795 PCT