Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0292 ATGGCTGCAGTACCGCAAAATAGCAGCAGCAGGCTTCAAAACATGTTGCGTGGTGCAGTACAATCAGTTCAGTGGACTTACAGCCTCTTCTGGCAACTATGTCCACAACAAGGGATATTAACGTGGGTTGATGGATACTACAACGGAGCAATAAAGACACGGAAGACAGTGCAAGCAAACGCAATGGAGGTTAGCACTGAGGAAGCGTCTCTGCAAAGAAGCGAACAACTTAGAGAGTTATACGAATCCTTGTCTGCAGGTGGGGAAACTACTATTCGAAGACCTTCTGCTGCTCTGTCGCCGGAGGATCTAACCGAATCCGAATGGTTCTACTTGCTGTGCGTCTCTTTCCAGTTTCATCCTGGTATCGGGTTGCCCGGAACAGCATATGCGAGGAGGCAGCATATATGGCTCAGTGGTGCAAACGAAGTAGACACCAAAACATTTTCAAGAGCTATTCTTGCCAAGACAGTGGTGTGCATTCCTGTGTTGGATGGCGTCGTTGAGTTGGGCACAACCGATAAGTTGGAAGAAGATCTTAATTTCATCCAACACATAAAGAGCTTCTTCATAGATCATGATCACCAGCACCCTCCTCCAATTACAACAAAGCCTGCACAATCAGAGCAATACTCCACCTCCAATAATCCCACATCTTCTTCTTCTTCATACCCTGTTGTTGTCGCACCCAGCTGCAGCATCATCCAAAACGACATGAACGACGTTGTTAATAATAATTCAGAAGCAGAAATAGCACTCCGTAACAACAATAGTTTCATACCGAGCGAGCTAATGGAACTGGACGCCTTGGAGGAATTTAGGGTCGTTGGAGATGGCTCCAACAACCACTTGGAGGAGGATTCTATGGCACTCACATCCTCCCTTAGAAAACCTAGCACAAGGCGACACAGATACTCACTACTCTCAAACAGTGTCCAGCATCCTTCAAAAGAACTCCGGGTGGTGGCCGGAATCACCCTCCGTCAACCACCTCACCGATTCCTTTCGGTCAGCTTTCAACAAATGGAACTCCGTCGCCGACGACCACCACCACCAGAACTTCCACGTGACTGTGGCCGACGTCACCTCCCAGTGGCTCCTCAAGTACATTCTGTTCAGCGTCCCATACTTGCACGCCAACCGGCTCAAGGGCAAGGGCGCTCCGCCATACGAGACCAGCCACAGAGCGAGGCGCTGTTGGAAGTGGAGTGTGTGCATAGGGAAGGGTTGTTGGTGGATGTGATGAAAATGTTGAGGGAGATAGGGGTGGAAGTGATGATGGTGCAATCGTGGGTTAAGGATGATGGAGTGTTGGTGGCGGAGATGAGGGCCAAGGTGAAGGAACATATTGGTAATGGGAAAAAGGCTAGCATTGTGGATGTGAAAAATGCCCTCAACCAGATTATACCCCATCATGAGCAATATACACTTGCTTGCTTCCAATGA 1446 0.4882 MAAVPQNSSSRLQNMLRGAVQSVQWTYSLFWQLCPQQGILTWVDGYYNGAIKTRKTVQANAMEVSTEEASLQRSEQLRELYESLSAGGETTIRRPSAALSPEDLTESEWFYLLCVSFQFHPGIGLPGTAYARRQHIWLSGANEVDTKTFSRAILAKTVVCIPVLDGVVELGTTDKLEEDLNFIQHIKSFFIDHDHQHPPPITTKPAQSEQYSTSNNPTSSSSSYPVVVAPSCSIIQNDMNDVVNNNSEAEIALRNNNSFIPSELMELDALEEFRVVGDGSNNHLEEDSMALTSSLRKPSTRRHRYSLLSNSVQHPSKELRVVAGITLRQPPHRFLSVSFQQMELRRRRPPPPELPRDCGRRHLPVAPQVHSVQRPILARQPAQGQGRSAIRDQPQSEALLEVECVHREGLLVDVMKMLREIGVEVMMVQSWVKDDGVLVAEMRAKVKEHIGNGKKASIVDVKNALNQIIPHHEQYTLACFQ 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0292 481 PANTHER TRANSCRIPTION FACTOR TT8 371 471 - -
Aed4g0292 481 PANTHER TRANSCRIPTION FACTOR TT8 371 471 - -
Aed4g0292 481 MobiDBLite consensus disorder prediction 197 224 - -
Aed4g0292 481 PANTHER TRANSCRIPTION FACTOR TT8 11 275 - -
Aed4g0292 481 MobiDBLite consensus disorder prediction 201 224 - -
Aed4g0292 481 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 190 IPR025610 -
Aed4g0292 481 PANTHER TRANSCRIPTION FACTOR TT8 11 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0292 Aed-Chr4 2101296 2107526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0292 395 471 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 44.156 2.25e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0292 - - gmx:100802733 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0292 4 2101296 2107526 Aed4g0292 4 2101296 2107526 ECH