Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0258 ATGACGACGATTCGAAGATTTTGCTGCAACGATCTTCTTCGATTTACCGACGTCAATCTCGACCATCTCACCGAAACATTCAACATGTCCTTCTACATGACCTACCTTGCAAGATGGCCCGACTATTTCCACGTTGCTGAGGGCCCTGGCAACCGAATCATGGGTTACATTATGGGTAAAGTGGAGGGGCAAGGAGAATCATGGCATGGTCATGTAACTGCAGTAACCGTTGCTCCAGAGTATCGCAGGCAGCAGTTAGCCAAGAAACTTATGAATATGCTGGAAGATATCAGTGACAATATTATCAGAGGGTTTGGTCTTCCCTGCCTTTTTCACTTCCATTCTCATGTCACAGTAAACCTTAGTTGTCAGTCAGCTTTCAGCCACTGCCTTCCACCATCCAGAGTATATCTGTCTAGATACCTAATTTTCCAGAGTGTCTTCACATTTACAGCTGTTTCCAAACTAGGGCATCCAGATTCTCAGTCACGTACCACCACATGCAGCCACAATCTCTATCCTGACAGTGACAAGGCTTACTTTGTTGATCTCTTTGTGAGAGCATCAAATGCACCAGCCATCAAGATGTATGAAAAGCTTGATTATGTGATTTATCGACGAGTGCTACGCTACTATTCTGGGGAAGAAGATGGTTTAGATATGAGGAAGGCCTTGTCTCGTGATGTTGAAAAGAAGTCTATAATCCCTCTTAAACGCCCAGTCACTCCTGATGAATTAGAGTATGACTAA 750 0.4413 MTTIRRFCCNDLLRFTDVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVAPEYRRQQLAKKLMNMLEDISDNIIRGFGLPCLFHFHSHVTVNLSCQSAFSHCLPPSRVYLSRYLIFQSVFTFTAVSKLGHPDSQSRTTTCSHNLYPDSDKAYFVDLFVRASNAPAIKMYEKLDYVIYRRVLRYYSGEEDGLDMRKALSRDVEKKSIIPLKRPVTPDELEYD 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0258 249 Pfam Acetyltransferase (GNAT) family 39 98 IPR000182 GO:0016407
Aed4g0258 249 CDD NAT_SF 45 97 - -
Aed4g0258 249 Gene3D - 2 237 - -
Aed4g0258 249 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 174 248 - -
Aed4g0258 249 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 103 - -
Aed4g0258 249 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 174 248 - -
Aed4g0258 249 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 103 - -
Aed4g0258 249 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 2 216 IPR016181 -
Aed4g0258 249 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 226 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0258 Aed-Chr4 1867958 1872999 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Aed4g0258 Acetyltransf_1 4.5e-08 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0258 K17972 - gmx:100306394 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0258 4 1867958 1872999 Aed4g0258 4 1867958 1872999 ECH