Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0253 ATGCCAAACACGCCGCGAACAAGAAAAAGAAACAACCACAGCCGCCGCTTGAACCTGAGTCTATGTTTCGCAAATCCCATGCAACCGTTCACACCGAAATCTCCCCCGACAAGCCCCACCGCCACTTCCTCAACCGCTGATCACAATCACAACCGTCCATCACCACCCGCCACTTCATCAAGCCCGATCAACTATGATCGCAGTACCAGCTTGTCCCCACAAAACCCATATCCGAGCCTTGGACTCGACTTGGCCACCGCTTTTGCCTCCCAACGCTTCTTCTTCACCTCCCCCGGCCGCTCCAACTCCATTGTCGAATCCACCGCCACCGCCACCACCGACTGCACCACATCCTCATCCACGCCGTCACCGCTGCAGCAGCCAGACCGACTCAAGAGTGTGACTTGCGGTTCAACGGCAGCAGAGGCGTTATTAGATAGCAGCAGCGTTGCGGTAACGAAGTACTCGCCGGACCCCTACGCGGACTTCCGGAAGTCGATGGAGGAGATGGTGGCGGCGCGTCCAGAGTTGATGGACGTGGCGGCAAAATGGCGGGAGCTGCACGAGCTTCTTCTCTGCTACCTTGCGCTGAACCCGAAGAGCACGCATAAGTTCATTCTCTGTGCTTTTTCTGATTTTCTCCTCAGCCTCATATCGCGATCTTATAACTCGCCGCCGCAGGATCCCGTTCCCGGTGGCGATCATGTGGGGAATGGGAAACCTGAACCCGATCCCAAAGTTGGTCCCCGTAGCCATGCATTCGGTGTCGTAAAACCTCTTTTGAATAGGGAATACCTAGCTTATGAAGAGTAA 813 0.556 MPNTPRTRKRNNHSRRLNLSLCFANPMQPFTPKSPPTSPTATSSTADHNHNRPSPPATSSSPINYDRSTSLSPQNPYPSLGLDLATAFASQRFFFTSPGRSNSIVESTATATTDCTTSSSTPSPLQQPDRLKSVTCGSTAAEALLDSSSVAVTKYSPDPYADFRKSMEEMVAARPELMDVAAKWRELHELLLCYLALNPKSTHKFILCAFSDFLLSLISRSYNSPPQDPVPGGDHVGNGKPEPDPKVGPRSHAFGVVKPLLNREYLAYEE 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0253 270 MobiDBLite consensus disorder prediction 111 130 - -
Aed4g0253 270 MobiDBLite consensus disorder prediction 37 76 - -
Aed4g0253 270 ProSiteProfiles OVATE domain profile. 152 216 IPR006458 -
Aed4g0253 270 MobiDBLite consensus disorder prediction 25 76 - -
Aed4g0253 270 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 150 218 IPR006458 -
Aed4g0253 270 MobiDBLite consensus disorder prediction 225 253 - -
Aed4g0253 270 Pfam Transcriptional repressor, ovate 156 217 IPR006458 -
Aed4g0253 270 PANTHER TRANSCRIPTION REPRESSOR OFP12 15 224 - -
Aed4g0253 270 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 15 224 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0253 Aed-Chr4 1840449 1841944 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aed4g0253 Ovate 9.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0253 - - gmx:102659610 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0253 4 1840449 1841944 Aed8g0824 8 7004433 7006522 PCT