Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0234 ATGTTCCCCACGGCTATTTCCAATTCAACTTCTTTGTCCGAGGATGCCAGTGTTTCTTCTGGTACAAAAGTTCAGGACTTGGGAGGACTCAATCAACAACAGCCTCAAAAGATCAAGAAAAAAAGAAGCCTCCCTGGAAATCCAGACCCAGATGCTGAAGTGATAGCCTTATCACCGAAGACCCTTTTGGCCACTAATAGATTTGTTTGTGAGATCTGTCTAAAGGGTTTCCAGAGAGATCAGAACCTACAGCTTCATAGGAGGGGTCACAACCTCCCTTGGAAGCTAAAGCAAAGGAACGGCAAAGAGGTGAAAAAGAAAGCCTACGTTTGCCCTGAACCTTCATGCGTTCACCACAACCCCTCAAGGGCCCTCGGGGATCTTACAGGAATCAAGAAACACTTCTGCAGAAAGCATGGAGAGAAGAAGTGGAAATGTGAAAAGTGCTCTAAGATATATGCGGTTCAGTCAGATTGGAAAGCTCACTCTAAAACCTGTGGTACTAGAGAATATAGATGTGACTGCGGAACCCTTTTTTCCAGGAAGGACAGTTTCATAACTCATAGGGCGTTCTGTGATGCATTGGCGGAAGAAAGTGCAAGACTATCAGCAAATCAATTAGCCGCCACCGCCGCGACCACAACAAACCCATTCCAATCTCTGTATCTTTTCCAAAGCCAACAACAGAACTTCCAAAACCACCAAATGACGAGTTTCAACCAATGGGAATCATCTGAAGAAAACCCTAACCCTAGCAACATTATGGCTACTTCTTACAACATCAAGCCAGAGTCTCAGACGTTCCACAACCCCCTCTCTTCACTTCTCCAACAGCAACAGCAAGACCCCAACAACAAGGGCATGAATATGATAAGCTCACCCTTCGGGAACCTCCACGTGGCCACGCAAGCAGCGCCTGCATACATGTCAGCCACTGCGCTGCTTCAAAAGGCTGCAACCGTTGGAGCCGCTGCCATCACGGGCCCAGAAGCTGGAGGCCCTGTTGGGCCACAGCGCGCAATGGGTCACGTGACGACCCACCTCGGCGAGGGCGAGTTCGGAATCGGAACAGTGAGTCAACTCGACCCGGTGTCAGTGCCAGATAACAACAACAACTACTACATGACGCGGAGCCTCAAGAGCGACCGTCTCACGAGGGACTTTCTTGGTCTCACAGCAGACGCTAACGGCGGAGTTGACGTTAGCAACAATGTGAAGGATATGCTGACGTTCGCGGGAGGCGTAGAGTACCACCAACCGCACCGTCAACATCATCACCACGCGCTTCTGAAGCCCCAACAAGGCTTTGGTTTCCTTGGGACAGCCACTGCCCCCGAGACGTGGGGGAATTGTTAG 1356 0.5015 MFPTAISNSTSLSEDASVSSGTKVQDLGGLNQQQPQKIKKKRSLPGNPDPDAEVIALSPKTLLATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRNGKEVKKKAYVCPEPSCVHHNPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKIYAVQSDWKAHSKTCGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARLSANQLAATAATTTNPFQSLYLFQSQQQNFQNHQMTSFNQWESSEENPNPSNIMATSYNIKPESQTFHNPLSSLLQQQQQDPNNKGMNMISSPFGNLHVATQAAPAYMSATALLQKAATVGAAAITGPEAGGPVGPQRAMGHVTTHLGEGEFGIGTVSQLDPVSVPDNNNNYYMTRSLKSDRLTRDFLGLTADANGGVDVSNNVKDMLTFAGGVEYHQPHRQHHHHALLKPQQGFGFLGTATAPETWGNC 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0234 451 MobiDBLite consensus disorder prediction 1 40 - -
Aed4g0234 451 ProSitePatterns Zinc finger C2H2 type domain signature. 70 90 IPR013087 -
Aed4g0234 451 MobiDBLite consensus disorder prediction 1 51 - -
Aed4g0234 451 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 8 431 - -
Aed4g0234 451 SUPERFAMILY beta-beta-alpha zinc fingers 67 164 IPR036236 -
Aed4g0234 451 Gene3D Classic Zinc Finger 102 192 - -
Aed4g0234 451 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 90 IPR013087 -
Aed4g0234 451 PANTHER PROTEIN INDETERMINATE-DOMAIN 12 8 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0234 Aed-Chr4 1679049 1683910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0234 15 440 IDZ Gene Family AT4G02670 49.888 3.50e-126 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed4g0234 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0234 K25870 - gmx:100788975 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0234 4 1679049 1683910 Aed8g0853 8 7237574 7241033 PCT
Aed8g1747 8 22453646 22458290 Aed4g0234 4 1679049 1683910 PCT