Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0228 ATGGGTCTGGAAAAGAATCCCCGTGTGTTTTTTGATGTCTCAATTGATGGGGACCCTGTGGAAAGAATTGTTATTCAGCTTTTTGCCAGTATTGTTCCCAAGACAGCAGAGAATTTTCGGGCACTTTGTACAGGTGAGAAAGGCATTGGAGAATCAACAGGAAAACCTTTGCATTATAAAGGGACAAGCTTTCATCGTATTATTAGAGTTCCCTTTTTGGCTGTCATATCCTTTACAAAGACTGGTAAGGAACAACCTTTGACTGCTTTGCAGGCACAGGCGGAGAAAGTATATATGGAGGGAAATTTGCAGTGCTTCTTCCTTGCAGATGAAAATTTCAAACTAACACATGATGGACCTGGCGTTCTTTCTATGGCTAATAGTGGTCCTAACACAAATGGATCTCAGTTCTTTATTATATTCAAGCGCCAACCTCATCTTGACGGGAAACATGTTGTTTTTGGAAAAGTTGTCAATGGAATGGACATTTTGAAGAAAATTGAGCAGGTAGGAACATCTGATGGGAAACCTACCCAGGCAGTTAAAATTATTGATTGTGGTGAAGTCTCTGAAACAAAAATTCAGCATACTGCCGAGAAGGAGAAAGGGAAAAGGAGAAAATCAGAGAAATCCCTATCTTCTGATGATAGTTCTGACAAAAAATCAAGGGGAAAAAGAAAAAAATATTCCAAAGACACAAGGAAGAGAAGGAAGAGATACTCAACATCTGATAGTGATAGTGATAGTTATTCCTCAGATTCTGAGTCAGATTCAGCTTCAGATTCGTCAGTTTCTGATTCCAGTTCCGCTAGTTATGGGAAACACCAGAAGAGGAGGAGAAATAAGCGCAAGCATGGGAAGAAGAAGAAAATTGGAGGAAAGTGGAGAAAGAGAAGCCAGAACAGTAGAAGTAGAAGATCAAGACACAAGTCTAGGCGGTCTGATTCAAGTGATACAGATAGTGCTAGTGGCAGTAGTTCTGGTGACGAGAAAGCTGATCGTCGTGCCTCAGATCGTAAAACACATGTTGACGATAAAGCCCAAAGAAATCTAGACACAGGAAAGCAATCTTCTAGCCCTCCTCAGCAAAGGCAAACTATTCCTGAACAAACAATGGATCCCAAAGGTAGAAGAATTGTGGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCAGAAAACAGTGCATTTGTGAATAACGGGCATGATACTCAAGCTGGATTTAGTAAACCTGCTAAGCAGCATGCTAATTCAGATGATTCAAATCGCAATAGAGGTACAAGTCCTGGAAGAAGTCCTACCAGGGATTCTGGGGAGCTAAACCAAGAACGTGCTTCATTGTTGGCTAGTCCTGGCCAAAAAGCACCTGAACCTGCAGCCCCCAAACATGGTCAGGGCTTTACAAAAAGCCCTTCACCAAATGGCATGCCTAAGCGAATTAAAAAAGGACGTGGTTTTACTGAGCGTTATGCCTTTGCACGCAGATACCGTACTCCATCTCCAGAGCGGTCTCCTCGTACATATCGTTATGGTGATAGAAATATCAGAAGGAACTTTGATAGAAACACAAACTACAGAAATTATTCTGAGCGCTCTCCACCACGACGTTTTCAAAGCCCGCCAGGGGGCAGGAATCGGCCAAGGTACCAAAGCAGAAGAAGTCGGAGTAGGAGCAACTCCCGCAGTCCAGTGCGTGGCCGTTTCAGAGACCGGGACCATGATCGTAGCCGTAGTCCTAGACGCAGTCCTAGTCCTGAAGACAGACGGCCTCCGATAAGTGACAGATTAAAATCCCGACTTGGTCCAAGAAGTGACGAACTATTGCCAGAAAGGGGGAGGTCAAAGTCAAAATCAAAATCTAGGAGCAATGGCTCATCTCGCTCCAGATCCCCTGATGCTACACCACCAAAACGATTTGATAAAAGGACTTCTGTATCTCGTAGCAGGTCTAGATCGAGCTCTCCATCTGGACAAAAGGGTTTAGTTTCTTATGGAGATGCTAGTCCTGATTCTGGCTCAAGGTGA 2025 0.436 MGLEKNPRVFFDVSIDGDPVERIVIQLFASIVPKTAENFRALCTGEKGIGESTGKPLHYKGTSFHRIIRVPFLAVISFTKTGKEQPLTALQAQAEKVYMEGNLQCFFLADENFKLTHDGPGVLSMANSGPNTNGSQFFIIFKRQPHLDGKHVVFGKVVNGMDILKKIEQVGTSDGKPTQAVKIIDCGEVSETKIQHTAEKEKGKRRKSEKSLSSDDSSDKKSRGKRKKYSKDTRKRRKRYSTSDSDSDSYSSDSESDSASDSSVSDSSSASYGKHQKRRRNKRKHGKKKKIGGKWRKRSQNSRSRRSRHKSRRSDSSDTDSASGSSSGDEKADRRASDRKTHVDDKAQRNLDTGKQSSSPPQQRQTIPEQTMDPKGRRIVDKQSHEEGELSPENSAFVNNGHDTQAGFSKPAKQHANSDDSNRNRGTSPGRSPTRDSGELNQERASLLASPGQKAPEPAAPKHGQGFTKSPSPNGMPKRIKKGRGFTERYAFARRYRTPSPERSPRTYRYGDRNIRRNFDRNTNYRNYSERSPPRRFQSPPGGRNRPRYQSRRSRSRSNSRSPVRGRFRDRDHDRSRSPRRSPSPEDRRPPISDRLKSRLGPRSDELLPERGRSKSKSKSRSNGSSRSRSPDATPPKRFDKRTSVSRSRSRSSSPSGQKGLVSYGDASPDSGSR 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0228 674 MobiDBLite consensus disorder prediction 393 448 - -
Aed4g0228 674 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 17 187 IPR002130 GO:0000413|GO:0003755
Aed4g0228 674 MobiDBLite consensus disorder prediction 194 223 - -
Aed4g0228 674 MobiDBLite consensus disorder prediction 245 271 - -
Aed4g0228 674 MobiDBLite consensus disorder prediction 274 310 - -
Aed4g0228 674 MobiDBLite consensus disorder prediction 548 562 - -
Aed4g0228 674 MobiDBLite consensus disorder prediction 352 370 - -
Aed4g0228 674 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 109 417 - -
Aed4g0228 674 MobiDBLite consensus disorder prediction 481 524 - -
Aed4g0228 674 SUPERFAMILY Cyclophilin-like 5 189 IPR029000 -
Aed4g0228 674 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 109 417 - -
Aed4g0228 674 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Aed4g0228 674 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 149 164 IPR002130 GO:0000413|GO:0003755
Aed4g0228 674 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 148 IPR002130 GO:0000413|GO:0003755
Aed4g0228 674 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 136 IPR002130 GO:0000413|GO:0003755
Aed4g0228 674 MobiDBLite consensus disorder prediction 327 351 - -
Aed4g0228 674 MobiDBLite consensus disorder prediction 633 647 - -
Aed4g0228 674 MobiDBLite consensus disorder prediction 374 389 - -
Aed4g0228 674 Gene3D - 2 190 IPR029000 -
Aed4g0228 674 MobiDBLite consensus disorder prediction 563 617 - -
Aed4g0228 674 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 69 - -
Aed4g0228 674 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 188 IPR002130 GO:0000413|GO:0003755
Aed4g0228 674 MobiDBLite consensus disorder prediction 194 674 - -
Aed4g0228 674 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 4 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0228 Aed-Chr4 1639134 1644872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0228 3 185 U-box Gene Family AT5G67530 37.766 2.77e-22 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0228 K09566 - gmx:100791082 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0228 4 1639134 1644872 Aed4g0228 4 1639134 1644872 ECH