Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0223 ATGGAGTCTCACGGTGGAGGACCCCTCCGTTCCCGCAGTTCTCAGTCCCCTTCCCCCTCCCACTCCGCCTCCGCCTCCGCCACCTCCTCCATCCACAAGCGCAAGCTCGCGTCCGAGGACCACGCGCCTCCCTTCCCTCCCTCCTCCTTCTCCGCCGACACTCGCGACGGCGCCCTCACCTCCAATGACGACGTCGAGAGCATCTCCGCCCGCGGCGCCGACTCCGACTCCGACGACGACTCAGAGGACGCCGTCGTCGACGACGACGAGGACGACTACGACAACGACTCCTCCATGCGCACCTTCACTGCTTCCAGACTCAGCAACCCTCCCTCCGCTCCCCGCAACACCAAGCTCAAGACGGAAAACTCCACCGTCAAAATTGAGAACTCCGACGGCGCCAAAGACGCCGGAACCGCCGGCACTGGTGCTGCCGCCGCCGCCGCCGTGGGATCCTTCCCCGGGATTGTGGTGAAGGAGGACCTCTCTAAGATTTTTACTGATAATTTGCAAACAAGTGGGGCTTACACCGCTAGGGAAGAGAGTCTCAAGAAAGAGGAGGAAGCAGGAAGGCTCAAATTTGTTTGCCTTTCGAATGATGGTGTTGATCAGCATATGGTTTGGTTAATTGGATTGAAGAATATATTTGCTAGGCAACTTCCCAATATGCCCAAGGAGTACATTGTCCGACTTGTTATGGATAGGAGCCATAAGTCTGTAATGGTTATAAGGCGCAATCACGTTGTTGGAGGCATTACATATCGCCCATATGCTAGCCAGAGGTTTGGTGAGATAGCCTTCTGTGCAATTACAGCTGATGAACAAGTAAAGGGTTATGGTACCAGATTGATGAATCACTTAAAACAGTATGCACGAGATATAGATGGACTGACACATTTTCTCACATATGCTGACAATAATGCTGTTGGCTATTTTATCAAACAGGATTACGATGGAGGAATTCTCATGGAATGCAGGATTGATCCCAAGCTTCCTTACACTGATTTGTCAACTATGATCCGTCGTCAAAGGCAGGCAATTGATGAAAAAATCAGAGAGCTGTCAAACTGTCACATCGTTTATACTGGAATTGATTTTCAGAAGCAGTCAATGAGCGATCACGCAGATGCTTGGCCATTCAAGGAACCAGTTGATTCACGGGATGTTCCTGATTATTATGACATCATCAAAGATCCAATGGATTTGAAGACAATGTCTAAGAGAGTGGAATCAGAGCAATATTATGTAACATTTGATATGTTTGCTGCGGATGTCCAAAGAATTGCTATCCAGCGTAGTTGCATGGATTGCATTATCCCTGTTAGTCTTGTGCTTTGA 1338 0.4978 MESHGGGPLRSRSSQSPSPSHSASASATSSIHKRKLASEDHAPPFPPSSFSADTRDGALTSNDDVESISARGADSDSDDDSEDAVVDDDEDDYDNDSSMRTFTASRLSNPPSAPRNTKLKTENSTVKIENSDGAKDAGTAGTGAAAAAAVGSFPGIVVKEDLSKIFTDNLQTSGAYTAREESLKKEEEAGRLKFVCLSNDGVDQHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYASQRFGEIAFCAITADEQVKGYGTRLMNHLKQYARDIDGLTHFLTYADNNAVGYFIKQDYDGGILMECRIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYTGIDFQKQSMSDHADAWPFKEPVDSRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFDMFAADVQRIAIQRSCMDCIIPVSLVL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0223 445 Pfam Acetyltransferase (GNAT) family 239 310 IPR000182 GO:0016407
Aed4g0223 445 ProSiteProfiles Bromodomain profile. 372 428 IPR001487 GO:0005515
Aed4g0223 445 PANTHER GH11602P 3 369 IPR037800 GO:0004402
Aed4g0223 445 PANTHER GH11602P 370 428 IPR037800 GO:0004402
Aed4g0223 445 MobiDBLite consensus disorder prediction 53 68 - -
Aed4g0223 445 MobiDBLite consensus disorder prediction 8 32 - -
Aed4g0223 445 MobiDBLite consensus disorder prediction 1 124 - -
Aed4g0223 445 Gene3D - 334 430 IPR036427 GO:0005515
Aed4g0223 445 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 192 328 IPR000182 GO:0016407
Aed4g0223 445 SMART bromo_6 353 443 IPR001487 GO:0005515
Aed4g0223 445 MobiDBLite consensus disorder prediction 76 95 - -
Aed4g0223 445 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 213 317 IPR016181 -
Aed4g0223 445 CDD NAT_SF 239 293 - -
Aed4g0223 445 PRINTS Bromodomain signature 405 423 IPR001487 GO:0005515
Aed4g0223 445 PRINTS Bromodomain signature 375 388 IPR001487 GO:0005515
Aed4g0223 445 PRINTS Bromodomain signature 389 405 IPR001487 GO:0005515
Aed4g0223 445 Pfam Bromodomain 371 429 IPR001487 GO:0005515
Aed4g0223 445 MobiDBLite consensus disorder prediction 98 124 - -
Aed4g0223 445 PANTHER BNAC04G26160D PROTEIN 3 369 - -
Aed4g0223 445 PANTHER BNAC04G26160D PROTEIN 370 428 - -
Aed4g0223 445 SUPERFAMILY Bromodomain 369 428 IPR036427 GO:0005515
Aed4g0223 445 Gene3D - 188 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0223 Aed-Chr4 1614114 1619857 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Aed4g0223 Acetyltransf_1 6.8e-08 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0223 K06062 - gmx:100813942 659.062