Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0221 ATGGCGAATAACCCTTCCGACGCTCCCGCCGACGACTTCCTCGAACAAATCCTCGGCCTCTCGACCTTCGCTTCCGGCGACTCCGGCCTTTCCACCGCCGATGTCGGCCTGGCCGGTACGGCCACTCCTGGTCCGATGATGCTTCAGCTCAACTCCACCGACGCCAACGCTCACCTCGCCGGCGCCGCCTTCCACGCGCCGGTGTATCAGCTAGGATTGAGCTTGGACCAAGGCAAAGGAGGGTTCATGAAGCCCGAGGAAGCCTCCGCTAGCGGAAAGCGCTTCCGCGACGACGTCGTTGATAATAGAGCTAAGAATGTTTATCATGGGCAGCCCATGCCTACTACTATGCCTGCTGCTCCACATCCTCCAGCATTACGTCCAAGGGTGCGGGCCAGAAGAGGACAGGCTACAGATCCACACAGCATAGCTGAACGGTTACGCAGAGAAAGAATAGCAGAAAGAATCAGGGCATTGCAAGAACTGGTTCCAAGTGTCAACAAGACAGATAGAGCAGCCATGTTAGATGAAATTGTGGATTATGTCAAGTTCTTAAGGCTTCAAGTGAAGGTTTTGAGCATGAGTAGATTGGGTGGAGCCGGTGCAGTGGCACCACTGGTAACTGACATCCCATTATCATCAGTCGAGGAAGAAGGCGGTGAAGGTGCAAGAAACCGGCCAGCTTGGGACAAGTGGTCAAATGATGGCACAGAAAGACAGGTAGCTAAGCTTATGGAAGAAAACGTTGGGGCTGCCATGCAGTTTCTTCAATCAAAGGCTCTCTGCATCATGCCTGTCTCACTGGCATCGGCAATATACCAGTCACAACCACCGGACACCTCTAGCATAGTCAAGCCTGAAACTAATCCTCCTTCATAG 879 0.5347 MANNPSDAPADDFLEQILGLSTFASGDSGLSTADVGLAGTATPGPMMLQLNSTDANAHLAGAAFHAPVYQLGLSLDQGKGGFMKPEEASASGKRFRDDVVDNRAKNVYHGQPMPTTMPAAPHPPALRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGGEGARNRPAWDKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPVSLASAIYQSQPPDTSSIVKPETNPPS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0221 292 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 281 - -
Aed4g0221 292 Gene3D - 131 193 IPR036638 GO:0046983
Aed4g0221 292 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 281 - -
Aed4g0221 292 MobiDBLite consensus disorder prediction 108 140 - -
Aed4g0221 292 Pfam Helix-loop-helix DNA-binding domain 141 185 IPR011598 GO:0046983
Aed4g0221 292 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 136 185 IPR011598 GO:0046983
Aed4g0221 292 SMART finulus 142 191 IPR011598 GO:0046983
Aed4g0221 292 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 134 195 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0221 Aed-Chr4 1602378 1606892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0221 64 291 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 80.426 1.18e-121 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed4g0221 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0221 - - gmx:100797789 508.449