Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0212 ATGGAGTATGGACCCTCCCGCATGACACGCCGCCCAACGGCGCACGTTATCACACCCCCTAACTTCTCTAGCTGTCCTTTATTTTTTTTTGAGTCTAGCTGTCACATAAGAGAGAAGAAACACACACAGAACACGAACACAAACACAAACACAAAACACTCGGTTTCGGTTCATGCTCGAAGAGGTTCTCTCGATTCAGATCATCCACAACACAACAGAAGAGAAGAGAACAGAAAGTGCCTCTGCCAAATCGAAATCCAGCATAACCCACGTCAAATCCTCGCGAATCTCACCGACCCCATTCCCTATTCTCATCCATCTCCACCGATCGTTGTTGCTACTACCATTACCAACAGCTCCATCCATTTCTCCCACGCACGTTTCTTCGTTTTCTGCTCCACCCTCGTGCTCTTAATGCCACGAAATGGACGTAAATTTGGGAGGTGCAGGCGCGGAGCAGTGAGTGAGCGTGTGAGAGGGAAGAGGGAGCAGCAGCATGATGCCGAATCAGGTGGCGAAAGTTCGAAGGGACACGATTTCAGCATGCATGACTTGCCCACTCTGCAACAAGCTCTTCAGGGAAGCCACAACCATATCCGAATGTCTCCACACGTGAAGTGCATTTATGATAAAATTACGGATGAGGAGATAGAATGTTGTCCAATATGCAACATTGACTTGGGTTGTGTTCCAATCGAGAAACTGAGGCCAGACCACAGCTTGCAAGATGTAAGGGCCAAAGTTTTCCCCTTAAAGGGAAGAAAGGTGAAGGCACCTGAAGTTGTCACCTCAGTACCATTACCGGCTAGGAGAAAGGAGAGATCTCTTTCATCTTTGGTGGTCAGCACTCCAAGGGTATCTACACAGGCAACCATGACAGGAAGAAGAACAAAACCTACAAGAAAGGCTAGTGGTCTGCGCTCCACTAGCTTTTCCATTGAAAAGCCAATTAAAAAAGAGGAAGATTTACTTGAAGATCATCCTGATAGTTCAAGCTCACCCGACACTTCACATAAGTTTGCTCAGAATTCTGGACAGAGTATGTCACCTTGTGAGGGTAGTCAATCCATACCCAATAAAGGATCTGAGAATGGTGCCGAGCCATGGGATGCAAAATTGGATCTTTGGAAACCCTTGAATTGTTTAGTAGAGGTTGCAAGTAGGAGTAAATCTTTCAAGTCTAATGTGCAAGGGTCTGATACTAAATTAGAAACCAATCAAGTAAATGAGAGAGATTCTCAAGTTCAGAAAACCAAAAATAAGGAAAATAAACGTAAGGCAAAAATTGAGGATGAAAAGAGCAGCCCTTATCCTGTCTCATCAGACACAGCAAAACCAAATAAATTGCGCAGAATACGCAAGAAAAAGGAGCCTGCTTCTGGAGAATCTGGCATATCACCCCAAGCTGTGCTGGATTCTGCCAGCAATAGTACTCTCTCAAGGACTGGTCCAATTTGGTTCTCCTTAGTGGCTTCTGAAAACCAGGAAGGAGATGCTCCCTTGCCTCAAATTCCTTCAAGTTATTTGTGGCTGGATACGACGGCGTCCACGTCACAGAGAATTCCAGCAACTATTGGGTCCTCAGCAAAGGATTTTGTGATGGTCCTGGCTTATGCTCGGAAGGTTTCACACCCTTGA 1638 0.4573 MEYGPSRMTRRPTAHVITPPNFSSCPLFFFESSCHIREKKHTQNTNTNTNTKHSVSVHARRGSLDSDHPQHNRREENRKCLCQIEIQHNPRQILANLTDPIPYSHPSPPIVVATTITNSSIHFSHARFFVFCSTLVLLMPRNGRKFGRCRRGAVSERVRGKREQQHDAESGGESSKGHDFSMHDLPTLQQALQGSHNHIRMSPHVKCIYDKITDEEIECCPICNIDLGCVPIEKLRPDHSLQDVRAKVFPLKGRKVKAPEVVTSVPLPARRKERSLSSLVVSTPRVSTQATMTGRRTKPTRKASGLRSTSFSIEKPIKKEEDLLEDHPDSSSSPDTSHKFAQNSGQSMSPCEGSQSIPNKGSENGAEPWDAKLDLWKPLNCLVEVASRSKSFKSNVQGSDTKLETNQVNERDSQVQKTKNKENKRKAKIEDEKSSPYPVSSDTAKPNKLRRIRKKKEPASGESGISPQAVLDSASNSTLSRTGPIWFSLVASENQEGDAPLPQIPSSYLWLDTTASTSQRIPATIGSSAKDFVMVLAYARKVSHP 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0212 545 MobiDBLite consensus disorder prediction 414 435 - -
Aed4g0212 545 MobiDBLite consensus disorder prediction 276 311 - -
Aed4g0212 545 MobiDBLite consensus disorder prediction 389 476 - -
Aed4g0212 545 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 509 541 IPR044807 GO:0004842
Aed4g0212 545 MobiDBLite consensus disorder prediction 273 368 - -
Aed4g0212 545 MobiDBLite consensus disorder prediction 58 75 - -
Aed4g0212 545 MobiDBLite consensus disorder prediction 334 362 - -
Aed4g0212 545 MobiDBLite consensus disorder prediction 313 333 - -
Aed4g0212 545 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 206 509 IPR044807 GO:0004842
Aed4g0212 545 MobiDBLite consensus disorder prediction 151 182 - -
Aed4g0212 545 MobiDBLite consensus disorder prediction 389 413 - -
Aed4g0212 545 MobiDBLite consensus disorder prediction 151 180 - -
Aed4g0212 545 MobiDBLite consensus disorder prediction 43 57 - -
Aed4g0212 545 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 509 541 - -
Aed4g0212 545 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 206 509 - -
Aed4g0212 545 MobiDBLite consensus disorder prediction 40 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0212 Aed-Chr4 1532831 1538057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0212 179 509 C3H Transcription Factor Family AT2G30580 49.699 1.27e-86 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0212 K16277 - gmx:100793731 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0212 4 1532831 1538057 Aed8g0878 8 7522592 7530511 PCT