Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0209 ATGGAGAATGTTGAAGAAGCCAATAGAGCAGCTGTTGAGAGCTGTCATAGAGTTCTGAGTATGTTGTCTCAGCCAGGGAATGAAGTTCATTGTAGGAATTTGATGGTGGAAACTGGAGAGGCTGTAGTGAGATTCAAGAAAGTTGTTTCTCTGCTAAGTAGTGGTTCGGGCCATGCAAGAGTAAGGAAGCACAAAAAACTTCTTATCCCTTTTTCTCGAAGTATTCTCTTGGACAACCAAAACTGCAAAACTAATCATCATTCAGTTCAGGAATTGGGTCCAACAGTTAGAAATTCACTCTATATGGGAAACCCTTGTTTGGAATTGAGCTCCAATAAGAGAAGTCCTCTTTACCTTACCCAAAAAACTTCATCCACACATTACCACTTCCTCCAGCAGCAGCAACAAATGAAACATCAAGCAGAAATGATGTTTCGAAGGAACAGCAGTGTCATAAACTTGAATTTTGATAGCTCTAGCTGCACACCATCAATGTCGTCTACTAGGTCTTTCATTTCTTCCTTGAGCATAGATGGAAGCGTCGCTAACATGGATGGAAGTGCCTTCCATTTAGTAGGTGCAGCTCACTCTTCTGATCAGAACTCACAACAACACAAGAGAAAGTGTTCTTCGAGAGGTGATGAGGGTAGTGCAAAGTATGGGAGCAGTGCAAGATGCCATTGCTCAAAGAAGAGGAAACATAGAGTAAAAAGATCAATTAAGGTGCCGGCTACCAGCAACAAACTTGCAGATATTCCTCCCGATGATTATTCATGGAGGAAGTATGGGCAGAAACCAATCAAGGGATCACCTCACCCTAGGTGTGTTCAAGTTCTTTCTGATATTTGA 849 0.4193 MENVEEANRAAVESCHRVLSMLSQPGNEVHCRNLMVETGEAVVRFKKVVSLLSSGSGHARVRKHKKLLIPFSRSILLDNQNCKTNHHSVQELGPTVRNSLYMGNPCLELSSNKRSPLYLTQKTSSTHYHFLQQQQQMKHQAEMMFRRNSSVINLNFDSSSCTPSMSSTRSFISSLSIDGSVANMDGSAFHLVGAAHSSDQNSQQHKRKCSSRGDEGSAKYGSSARCHCSKKRKHRVKRSIKVPATSNKLADIPPDDYSWRKYGQKPIKGSPHPRCVQVLSDI 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0209 282 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 3 82 IPR044810 GO:0003700
Aed4g0209 282 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 126 275 IPR044810 GO:0003700
Aed4g0209 282 ProSiteProfiles WRKY domain profile. 248 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g0209 282 SUPERFAMILY WRKY DNA-binding domain 251 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed4g0209 282 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 3 82 - -
Aed4g0209 282 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 126 275 - -
Aed4g0209 282 Pfam WRKY DNA -binding domain 255 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g0209 282 SMART WRKY_cls 253 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g0209 282 MobiDBLite consensus disorder prediction 195 234 - -
Aed4g0209 282 Pfam Plant zinc cluster domain 206 251 IPR018872 -
Aed4g0209 282 Gene3D WRKY domain 231 278 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0209 Aed-Chr4 1526443 1527436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0209 1 274 WRKY Transcription Factor Family AT2G30590 50.000 5.70e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed4g0209 Plant_zn_clust 1.6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0209 - - gmx:100127372 454.136