Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed4g0208 | ATGAAGATAATGGCACGAGAGCGCAAACCTGTCGGCGAAACCCCAGACTGTCTCCACCCCTATTTATATCCAAACTCATCCCCCCTCTCACTCTCACTCTCACTTCAATCCCATCTTCACCCAATGCCTGTCCACGCGCTTCCAAATCCGAACCACTCTCCACCTCCGTCGAATCCCAGACCCGGGCCCGGGCCCAAGGAGGCCCATTTCAGGGGCGTCCGCAAGCGTCCCTGGGGCCGCTTCGCCGCCGAGATCCGCGACCCCTGGAAAAAGACCAGAAAGTGGCTCGGTACCTTCGACACCGCCGAGGAAGCCGCCAGGGCCTACGACTCCGCCGCCAGGACGCTACGTGGGCCCAAGGCCAAGACCAACTTCACCTACGTCGTCGCTCCCGCTCTCCACATCCCTCCCGCCGCCGTGCTCGCTACTCCCCAAGCCCAAGCCCAAGCCCAAGAGCAACTCGCAAGACAGGTCGAGTTCTGGCCGCCACCGTTGTTCTTCGCGGCGGATGTAGCCACCGTAGTGCCGGTGAGGTCGGAGTATAAGGGCTACAAGTTGGAGAATATTGGGGGGTTTGTGGTGAGCAAGGAGGAGCGGCAAGAGAATAAGAAGAAAAAGCCGTTTTTGTTCGACCTTAACCTGCCGGCGCCGCTCTTCTGA | 660 | 0.6015 | MKIMARERKPVGETPDCLHPYLYPNSSPLSLSLSLQSHLHPMPVHALPNPNHSPPPSNPRPGPGPKEAHFRGVRKRPWGRFAAEIRDPWKKTRKWLGTFDTAEEAARAYDSAARTLRGPKAKTNFTYVVAPALHIPPAAVLATPQAQAQAQEQLARQVEFWPPPLFFAADVATVVPVRSEYKGYKLENIGGFVVSKEERQENKKKKPFLFDLNLPAPLF | 219 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed4g0208 | 219 | SMART | rav1_2 | 69 | 132 | IPR001471 | GO:0003700|GO:0006355 | |
Aed4g0208 | 219 | MobiDBLite | consensus disorder prediction | 42 | 73 | - | - | |
Aed4g0208 | 219 | Gene3D | AP2/ERF domain | 68 | 128 | IPR036955 | GO:0003700|GO:0006355 | |
Aed4g0208 | 219 | PRINTS | Ethylene responsive element binding protein signature | 70 | 81 | IPR001471 | GO:0003700|GO:0006355 | |
Aed4g0208 | 219 | PRINTS | Ethylene responsive element binding protein signature | 92 | 108 | IPR001471 | GO:0003700|GO:0006355 | |
Aed4g0208 | 219 | ProSiteProfiles | AP2/ERF domain profile. | 69 | 126 | IPR001471 | GO:0003700|GO:0006355 | |
Aed4g0208 | 219 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 66 | 156 | - | - | |
Aed4g0208 | 219 | CDD | AP2 | 68 | 128 | IPR001471 | GO:0003700|GO:0006355 | |
Aed4g0208 | 219 | SUPERFAMILY | DNA-binding domain | 69 | 127 | IPR016177 | GO:0003677 | |
Aed4g0208 | 219 | MobiDBLite | consensus disorder prediction | 47 | 63 | - | - | |
Aed4g0208 | 219 | Pfam | AP2 domain | 69 | 118 | IPR001471 | GO:0003700|GO:0006355 | |
Aed4g0208 | 219 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 66 | 156 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed4g0208 | Aed-Chr4 | 1521896 | 1522555 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed4g0208 | 66 | 125 | AP2-EREBP Transcription Factor Family | AT1G50640 | 90.000 | 5.47e-32 | 114 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Aed4g0208 | AP2 | 1.4e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed4g0208 | K09286 | - | gmx:100816599 | 248.825 |