Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0187 ATGGGTACCAACTTGCACCAAGTACTCAGAAGCCTCTGTTTGAATACTCACTGGAACTACGCCATCTTTTGGAAGCTCAAACATCGTGCTCGAATGATCTTGACATGGGAGGATGCTTACTATAACAATCCTGATGATAATGACTCTTCAGAAAATAAGCACTGCCAGAAGACCTGGGAACAGATAGGTGGTGGGAAATTTTCACACAGTGCATTAGGGTTAGCTGTGGCTAAGATGTCATATCATGCATATTCATTAGGAGAAGGTATTGTTGGTCAGGTAGCTGTTACTGGAAAACATAGGTGGATCTGTCCAGATAATCAAGTTGCAGGTTCTGGCTTGTCTTTTGAGTTTGCTGATGGGTGGCAGTCTCAGTTTTCTGCTGGAATCAGGACTATTGCTGTTGTTGCTGTAGTCCCACTTGGTGTTGTTCAGCTTGGCTCTCTAAATAAAGTGATTGAAGATATGGGGTTTGTAACTCATGTCAGAAATCTTTTTATGTCTACTCAAAATTATTCAATCCAATGTCCAAGTCAAATACAGGGTAGTATGAAGAGTTCATCTCAGCTGGATATATTGAAGGAAAATTCGTCTTCAGATATTATGCCCTCATGCTTTTACGATACACAGAAATCTATGAAGAGTGAAACGGTGGATGTTTTAATGCCCCTTCAATGTTCTGGGACTGGGAGGAACTATACACCTCCTTCTGCTTGTGAAAAAATGTCTGATGATGTGGCCAAGCAAGAGGGCCCCGAATTGTGCAGTGATGAAAGCTCCATTTTGCTTCAGTCGATATCCAATATGATGAATGTGGAGTGTCAGGAAATTGAAGAGATGAAACCTCTATACGGGAGGAAGTATGAAGGAGGAAGTAGTGGCTGCAAAGATATGAGATTGGAATCAGAAAAAAATGTATCATCGTTTTTAAATGATTTTGTTACAGATAATACTAGCTTCAATGATTTAATATGTCCATCAGAAAAAGTCAGAGTTGATTCTGCATGCTTTCCTTCAGTTTTTCTTGATACAGTAGTTAGTGAAAGTGATAAATTGCGTTATGTGGATACTAACCAAAAAGGGACATTGAACTTTGCCCAACCTTCCGAAGCAAACTCCCAGGAACATATTGAGAAGTCAAAGTTTCATACTGAGCCTTGTTACAAGCTTATGTCTGACTTTCAAACTGAACCTTGTTACAAGGATGCTTCACACATGTTGAAGTTCCCTGCTGGCTGTGAGCTACATGAAGCACTTGGATCAGCTTTTTTGACAGGGGGTAAATGTTTTGATTGGCCAACACAGGTTAATCCAGAAATGAAAACTGTTGAAATGTCAGATGAGATTAGCACTAGCCAATTGACTTCTGAGTCTCGTCCAGAACATCTTTTGGAAGCAATGGTGGCCAATATTAGCCATAGCAATAATGATGTTAATAGTGAATTGTCGTTTTGTACATCTAAGCAATCTGCATTGGCCTCTGCAAAAAATCACGAAGCTTCTATTCACAATGTGCATACTATTAATTCAGAAGGCTATTCAATAGATCAGCTCTCTCTTGTCAAAGAGGACAAACATCATTCTTCATCATCAGGGATATGTGGTGTGATGTCCTCGAAAGGTGTTTCATCTACATTTCATAGTTCAAATAGTGGACAGCTTGAAAGGTCGTCTGAACCATCTAAGAACAGCAAAAAGAGGGCCAGGCCAGGGGAAAGTTGTAGGCCTCGGCCAAGGGACAGGCAACTGATCCAAGATCGCATCAAGGAGTTGAGAGAGCTGGTGCCAAGTGGAGCAAAGTGCAGTATTGATTCACTCCTGGAGCGTGCAATAAAGCACATGCTCTTTCTCCAAAGCATAACTAAACATGCTGACAAGCTAACTGACTTTGCTGATACGAAGTCAAAGTTGCATCACATGGAAGCAGACATTCATGGATCCTCTAGTTATGAGCAGGGCTCAAGCTGGGCCATGGAAGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAATGGACAGATGCTTGTTGAGATGCTCTGTGAGGAGTGCAGCCATTTTCTTGAAATAGCAGAAGCCATAAGAAGTTTGGGCCTTACCATTTTGAAGGGTGCAACAAAAGCTCATGGTGAAAAGATATGGATCTGCTTTGTTGTTGAGGGTCAAAACAACAAAAATGTACACAGATTGGATATCTTGTGGCCGCTTGTTCAAATACTGCAATCCAAGAGCACAGTGTATTCACAATAA 2265 0.4102 MGTNLHQVLRSLCLNTHWNYAIFWKLKHRARMILTWEDAYYNNPDDNDSSENKHCQKTWEQIGGGKFSHSALGLAVAKMSYHAYSLGEGIVGQVAVTGKHRWICPDNQVAGSGLSFEFADGWQSQFSAGIRTIAVVAVVPLGVVQLGSLNKVIEDMGFVTHVRNLFMSTQNYSIQCPSQIQGSMKSSSQLDILKENSSSDIMPSCFYDTQKSMKSETVDVLMPLQCSGTGRNYTPPSACEKMSDDVAKQEGPELCSDESSILLQSISNMMNVECQEIEEMKPLYGRKYEGGSSGCKDMRLESEKNVSSFLNDFVTDNTSFNDLICPSEKVRVDSACFPSVFLDTVVSESDKLRYVDTNQKGTLNFAQPSEANSQEHIEKSKFHTEPCYKLMSDFQTEPCYKDASHMLKFPAGCELHEALGSAFLTGGKCFDWPTQVNPEMKTVEMSDEISTSQLTSESRPEHLLEAMVANISHSNNDVNSELSFCTSKQSALASAKNHEASIHNVHTINSEGYSIDQLSLVKEDKHHSSSSGICGVMSSKGVSSTFHSSNSGQLERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPSGAKCSIDSLLERAIKHMLFLQSITKHADKLTDFADTKSKLHHMEADIHGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGATKAHGEKIWICFVVEGQNNKNVHRLDILWPLVQILQSKSTVYSQ 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0187 754 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 754 - -
Aed4g0187 754 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 754 IPR043561 GO:0003700|GO:0006355
Aed4g0187 754 MobiDBLite consensus disorder prediction 544 558 - -
Aed4g0187 754 MobiDBLite consensus disorder prediction 559 583 - -
Aed4g0187 754 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 581 623 IPR036638 GO:0046983
Aed4g0187 754 MobiDBLite consensus disorder prediction 544 583 - -
Aed4g0187 754 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Aed4g0187 754 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 568 617 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0187 Aed-Chr4 1377022 1383108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0187 1 749 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 40.541 6.32e-158 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0187 - - gmx:100798490 1397.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0187 4 1377022 1383108 Aed4g0187 4 1377022 1383108 ECH
Aed4g0187 4 1377022 1383108 Aed8g0905 8 7807390 7814322 PCT