Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0179 ATGGAGGGAGCTGGGAGAGGAAACAACGTTAACGTGGGTTCATCAAACGCAGAGGTGGCTCGGTACAGAGGGATTCGTAGGAGGCCATGGGGTAAGTTTGCAGCGGAGATTCGTGATCCCACAAGAAAAGGGGCTCGCATATGGCTTGGAACATTCGACACTGCTGAACAAGCTGCACGTGCTTATGATGCTGCTGCTTTTGGTTTTAGGGGTCACAAGGCCATACTCAACTTCCCAAATGAGTATGGTAACACTCACATCACTACTCCTAATCCAAACATGTATTCAGTTAATTCATCGCCTCTAATTCCTTCTTCTTCTTACCCTTCCTACTATGGTGAGGGTTCGTCGCAGCAACAACAACAACAACAAAGAATTGATGATGACACTTTTGAATTGGAATGCTTGGACAATAATTTGTTGGAAGAACTCCTTCGGCAGGCGCCTGATCGTTCAGGCAACTCAAATTGA 471 0.4628 MEGAGRGNNVNVGSSNAEVARYRGIRRRPWGKFAAEIRDPTRKGARIWLGTFDTAEQAARAYDAAAFGFRGHKAILNFPNEYGNTHITTPNPNMYSVNSSPLIPSSSYPSYYGEGSSQQQQQQQRIDDDTFELECLDNNLLEELLRQAPDRSGNSN 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0179 156 MobiDBLite consensus disorder prediction 106 128 - -
Aed4g0179 156 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Aed4g0179 156 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Aed4g0179 156 ProSiteProfiles AP2/ERF domain profile. 21 79 IPR001471 GO:0003700|GO:0006355
Aed4g0179 156 PANTHER DNA-BINDING DOMAIN 16 124 IPR044808 GO:0003700|GO:0009873
Aed4g0179 156 SUPERFAMILY DNA-binding domain 21 80 IPR016177 GO:0003677
Aed4g0179 156 SMART rav1_2 21 85 IPR001471 GO:0003700|GO:0006355
Aed4g0179 156 CDD AP2 20 80 IPR001471 GO:0003700|GO:0006355
Aed4g0179 156 MobiDBLite consensus disorder prediction 106 126 - -
Aed4g0179 156 Pfam AP2 domain 21 72 IPR001471 GO:0003700|GO:0006355
Aed4g0179 156 Gene3D AP2/ERF domain 20 80 IPR036955 GO:0003700|GO:0006355
Aed4g0179 156 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 16 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0179 Aed-Chr4 1310632 1311102 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0179 20 145 AP2-EREBP Transcription Factor Family AT3G23230 58.730 3.60e-39 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed4g0179 AP2 4.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0179 - - gmx:100778998 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0179 4 1310632 1311102 Aed8g0921 8 7942863 7943321 PCT