Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0177 ATGGCCAGGGAGCAAATTCAGGTGCTGAACGCGCTTGATGTGGCAAAAACACAATGGTACCATTTCACTGCAATCATCATTGCAGGAATGGGATTCTTCACCGATGCATACGATCTATTCTGCATATCTCTTGTCACAAAGCTGCTTGGCCGCATATACTACCACGTCGATGGCGCGGCGAAGCCGGGAACATTGCCTCCCAATGTTGCAGCTGCTGTAAATGGTGTGGCTTTCTGCGGAACACTTTCCGGCCAGCTTTTCTTCGGTTGGCTTGGTGATAAGATGGGAAGGAAAAAAGTCTATGGCATGACTCTCATGCTGATGGTCATATGCTCCATCGGTTCCGGCCTTTCGTTCGGACACAGTGCAAAATCTGTTATGGCAACTCTCTGCTTCTTCCGCTTCTGGCTTGGATTTGGCATTGGTGGAGACTATCCACTCTCTGCTACCATAATGTCTGAGTATTCCAACAAGAAGACTCGCGGCGCATTCATAGCTGCTGTGTTTGCTATGCAGGGCTTTGGAATTTTGGCAGGTGGTATATTTGCAATTATAATTTCAGTTGCATTCAAGAACAGGTTTGATGCTCCTGCATACAAAGTTGATCCAGCTGGCTCAACTGTTGCACAAGCAGACTACATATGGAGGATAATTGTGATGGTGGGAGCACTCCCGGCTGCATTGACATACTACTGGCGGATGAAGATGCCGGAAACAGCCCGTTACACGGCTCTAGTTGCCAAGAACACGAAGCAGGCTGCGGCTGATATGTCCAAGGTTCTGCAGGTTGAGATTCAAGCTGAACCGGCGGAGAAAGAATCCACGAAAAAGGCCTATGGATTGTTCTCAAAGGAGTTCCTCAGTCGCCATGGACTGCATCTGCTTGGCACAGCAAGCACATGGTTCTTGCTTGACATTGCATTCTACAGCCAAAATCTATTCCAAAAGGATATCTTCAGTGCAATTGGTTGGATACCTCCTGCAGAAACCATGAATGCAATGGAGGAGGTTTACAGAATTGCAAGGGCACAGACACTTATTGCTCTATGCAGTACAGTTCCTGGATACTGGTTCACAGTTGCTTTCATTGACAAGATTGGAAGATTTGCTATTCAATTGATGGGCTTCTTCTTTATGACTGTCTTCATGTTTGCTCTTGCCATTCCTTATGACCACTGGACTCATAAGGATAACAGAATAGGATTTGTGGTCATTTACTCATTGACCTTCTTCTTTGCAAATTTCGGGCCTAATGCCACCACATTCGTCGTGCCGGCGGAGATTTTCCCTGCTAGGTTCAGATCCACTTGCCATGGAATCTCATCAGCAGCAGGGAAGCTTGGGGCTATAGTTGGTGCATTTGGGTTCTTGTACTTGGCACAAAACAAGGACAAGAGCAAAACAGATGCAGGGTACCCTGCAGGTATTGGTGTCAAGAATTCACTCATTGTCTTGGGTGTGGTTAACATTTTAGGCTTCTTCTTTACTTTCTTGGTGCCTGAGGCAAATGGGAAATCATTGGAGGAGATGTCTGGTGAGAATGAAGAGGAAGTTGGAATCGGGGAAGGGTCAGAGCTGCAGCAGTCACATTCTCACAACAGAACTGTTCCATATGTTTAG 1620 0.466 MAREQIQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAAKPGTLPPNVAAAVNGVAFCGTLSGQLFFGWLGDKMGRKKVYGMTLMLMVICSIGSGLSFGHSAKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGIFAIIISVAFKNRFDAPAYKVDPAGSTVAQADYIWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNTKQAAADMSKVLQVEIQAEPAEKESTKKAYGLFSKEFLSRHGLHLLGTASTWFLLDIAFYSQNLFQKDIFSAIGWIPPAETMNAMEEVYRIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKDNRIGFVVIYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSAAGKLGAIVGAFGFLYLAQNKDKSKTDAGYPAGIGVKNSLIVLGVVNILGFFFTFLVPEANGKSLEEMSGENEEEVGIGEGSELQQSHSHNRTVPYV 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0177 539 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 1 520 - -
Aed4g0177 539 TIGRFAM 2A0109: phosphate:H+ symporter 11 513 IPR004738 GO:0005315|GO:0006817|GO:0016021
Aed4g0177 539 Pfam Sugar (and other) transporter 26 511 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aed4g0177 539 SUPERFAMILY MFS general substrate transporter 12 511 IPR036259 -
Aed4g0177 539 MobiDBLite consensus disorder prediction 508 539 - -
Aed4g0177 539 MobiDBLite consensus disorder prediction 524 539 - -
Aed4g0177 539 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 504 IPR020846 GO:0022857
Aed4g0177 539 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 520 - -
Aed4g0177 539 CDD MFS_PhT 25 501 - -
Aed4g0177 539 Gene3D MFS general substrate transporter like domains 20 527 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0177 Aed-Chr4 1280410 1282029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0177 1 512 Inorganic Solute Cotransporters AT2G38940 84.884 0.0 918
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0177 K08176 - gmx:100819445 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0177 4 1280410 1282029 Aed4g0177 4 1280410 1282029 ECH
Aed4g0177 4 1280410 1282029 Aed8g0199 8 1707127 1709004 PCT
Aed8g0923 8 7960247 7961827 Aed4g0177 4 1280410 1282029 PCT