Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0167 ATGGCTCTACCGTCAATGTCAATACTGTCAATATGGTGTCGCTACTTTCGCCAGAGGTTCGAATACTCTCTTCTTAGCTTGAAGTCCTTTGAACATATACGTGTTGAAATTAAGATGATTCTAAAGGGATATTTAAAGCATAACCGTGTTAAAGATCATAGCTATAAACATGAAGAACGTCAGCTTATGGCTACAGAGTTAAGTAACTTCATTTATAACACTGTCCTCTTCAAAAACTTGACTTACTTGCACTGGAATGAAGGAGACCAGGTGGCTCCTACTAGTATTGGAAAAGCAGAAACTCTTATTGTTCGGAAATTACCAATTGCAAATCCAAAGCATGTTTCTGTAGGAGATTTAGTGGTCTTGAAGAACCCTGAGAAGGCAGATAACTATCTAGTCAAGCGATTAATTGCTATTGAAGGTTATGAAATGGTTTCAACTGATGATAAAGATGAACCCTTTGTTCTTGAGAAGGATCAATGTTGGGTAGAAGCTGAAAATCAAAGTTTAAAATCCAAGGAAGCAAATGACAGTCGATCATTTGGTCCAGTTAACATGACAGATATTGTAGGCAGAGTCATATATCGCCGGCGAACCTATGTAGACCAGGGCTGTGTACAGAACAGTCATTCCAGCATGCTGAAGGATTGGCCAGTGTTGTTAGTGGAATTTGATGTTGAGGAGATGTCCAAGAATCACTAG 705 0.3901 MALPSMSILSIWCRYFRQRFEYSLLSLKSFEHIRVEIKMILKGYLKHNRVKDHSYKHEERQLMATELSNFIYNTVLFKNLTYLHWNEGDQVAPTSIGKAETLIVRKLPIANPKHVSVGDLVVLKNPEKADNYLVKRLIAIEGYEMVSTDDKDEPFVLEKDQCWVEAENQSLKSKEANDSRSFGPVNMTDIVGRVIYRRRTYVDQGCVQNSHSSMLKDWPVLLVEFDVEEMSKNH 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0167 234 PANTHER OSJNBA0068L06.9 PROTEIN 49 234 - -
Aed4g0167 234 CDD S26_SPase_I 102 194 IPR019533 GO:0004252|GO:0006465
Aed4g0167 234 SUPERFAMILY LexA/Signal peptidase 100 198 IPR036286 -
Aed4g0167 234 Pfam Signal peptidase, peptidase S26 98 144 IPR019533 GO:0004252|GO:0006465
Aed4g0167 234 Gene3D Umud Fragment, subunit A 63 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0167 Aed-Chr4 1243894 1248140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0167 116 205 MADS-box Gene Family AT1G29960 32.292 1.92e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0167 - - pdul:117637989 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0167 4 1243894 1248140 Aed4g0167 4 1243894 1248140 ECH