Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0133 ATGGCGCCCAATCCGAAAGTGGTGGCGGCCTTCGCGGCGATGTCGCATCTCGGGATTCATGAATCAAAAGTGAAACCAGTGTTGAAGAGACTGCTTAAATTGTATGATAAGAACTGGGCACTCATTGAAGAAGAGAGTTATAGGGCTCTGGCTGATGCAATATTTGAGGAGGAAGAGACTAAGGTGAATGAGCCGGACCAGAGTAATGAAAACAAGAAGGTCGGAGTAGTTGGCTGTGAAGAAGCTCCTATGCACGAGGAGCCTGTGCGACCTTTGAAGCGGTTGCGTTTGAGAGGCCAAGAGGGTCAATCTTCACGCCCTCTGACTAGCGGTGGCCCCAGCTCAGCTGCCTTTCTATTGAAAACGCCTAAATTGGAAGACGGCACAGTGCCTGAAAGTAGTTCCCGACTGCAGCCTCAAAGCACATCAGCATTATCTGACGGAAATGCAAGGATTGGTGCTCCTCACGTTTCCCCACAAGATGCCGTTATCGACAAGGGAAAGAAACCTATATCGCCTCAAGTTACTCCCAGAGGGGGAAGGTCCCTTGTAGAACCCCTTAAAGAGCCACCAACAATACCAGGAGCTGCTCCGTTGGCAAATAACAAAAAGCCTCATCCATTTAATTTGATCATGCCCAAGGATGAGCCTATTGATGATATGCCAGATTTTGCGATTCCCCTTGCAGTGATTCCTCCTGAACCATCAAGTAGAGAAGACTGTCTAATGGATGCAGCTGGAAAGCAAGATGGCCATGACACTGTGGTATCACAATGCAGAGATGAAGATGTTGAACATGAAGATGTTCTTCCTTGCTCAAGTGAAGAAGCAACTTCTAATGTAGATGTAGCATTGTCATCCATGGGAAAGGAAGAATCTGTAAAGATAACACTAACTGATGACGCTTCAAACAAATCTGAGACCAATGACTCATCGATTGTCAGAGGAAATAACGATGCAGTCATTGCAAATGGATCAATCATTAAGTCTTCTTCTGTCATGGCTGAACCTCAAGTTCCTAGTTCTCTAGCCTGCCCGAGTGATCTGGATGATGCTGTACTGGCTCCCAAGAAGGTTGGAGCGAATGGTTTCTTACAAAGTGATGGCGGGAAGGGGCTGGAGGATCCTATATCCCCAAAGTCACCCACTTTAGTGGCTGTTCCAAAACATCAGCTTACAACTGGTGATGTAAGGGGTGTTCATGATGTTAATGACCTAACAAAGGGAGAAGAAAGAGTGAAAATTTCATGGGTGAATAACACTACTAATGATTTCCCATCACCCTTTCACTACATACCCCGAAACCTTGTGTTCCGAGATGCTTATGTTAATATTTCTCTATCTCGTATTGGGAATGAGGATTGTTGTTCAACTTGTATGGGCAATTGTGTATCGTCATCTAAACCATGTTCTTGTACAAATAAAACTGGGGGTGAATTTGCTTACACTGCACAAGGCCTACTAAGGGAAGAGTTCTTGGACGAGTGTATTGCTATCAGCCGTGATCCTCAAAGTTATTTCTATTGCAAAGCCTGTCCTCTTGAAAGATCAAAGAATGATGATTGTTTAGAACCATGTAAAGGACACTTGGAGAGGAAGTTTATTAAAGAGTGCTGGAGCAAATGCGGCTGTGGGAAACACTGTGGCAATCGAGTTGTGCAGCGTGGAATAACTTGCAAGTTGCAGGTGTTTTTGACTTCTGATGGAAAAGGGTGGGGTCTTCGTACCTTAGAAGATCTTCCATTAGGTGCATTTGTATGTGAGTTTGTTGGGGAAATTTTAACCATCAAAGAGTTGCACGAGAGGAATATGAAATATCCCAAAAATGGGAAATATACATACCCAATTTTATTGGATGCAGATTGGGGTTCGGGAGTTGTGAAGGATAGGGAAGCTCTTTGCTTATATGCGGCATCGTATGGAAATGCTGCTAGATTTATTAATCACAGATGTTTGGATGCAAACTTGATTGAGATCCCAGTAGAAGTTGAGGGCCCAACTCATCACTACTATCATTCTGCCTTCTTCACATCCAGAAAAATAGCAGCACAGGAAGAGCTCACTTGGGATTATGGCTTGAACTTTGATGACCATGATGATAAGCCTGTTGAGCTGTTCCAGTGCAAATGTGGCAGTAAATTCTGTAGGAATATTAAGCGACCAAGTAGATCCATGAGATCGTCAATTGCATGA 2193 0.4409 MAPNPKVVAAFAAMSHLGIHESKVKPVLKRLLKLYDKNWALIEEESYRALADAIFEEEETKVNEPDQSNENKKVGVVGCEEAPMHEEPVRPLKRLRLRGQEGQSSRPLTSGGPSSAAFLLKTPKLEDGTVPESSSRLQPQSTSALSDGNARIGAPHVSPQDAVIDKGKKPISPQVTPRGGRSLVEPLKEPPTIPGAAPLANNKKPHPFNLIMPKDEPIDDMPDFAIPLAVIPPEPSSREDCLMDAAGKQDGHDTVVSQCRDEDVEHEDVLPCSSEEATSNVDVALSSMGKEESVKITLTDDASNKSETNDSSIVRGNNDAVIANGSIIKSSSVMAEPQVPSSLACPSDLDDAVLAPKKVGANGFLQSDGGKGLEDPISPKSPTLVAVPKHQLTTGDVRGVHDVNDLTKGEERVKISWVNNTTNDFPSPFHYIPRNLVFRDAYVNISLSRIGNEDCCSTCMGNCVSSSKPCSCTNKTGGEFAYTAQGLLREEFLDECIAISRDPQSYFYCKACPLERSKNDDCLEPCKGHLERKFIKECWSKCGCGKHCGNRVVQRGITCKLQVFLTSDGKGWGLRTLEDLPLGAFVCEFVGEILTIKELHERNMKYPKNGKYTYPILLDADWGSGVVKDREALCLYAASYGNAARFINHRCLDANLIEIPVEVEGPTHHYYHSAFFTSRKIAAQEELTWDYGLNFDDHDDKPVELFQCKCGSKFCRNIKRPSRSMRSSIA 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0133 730 CDD SET_SETDB-like 427 692 - -
Aed4g0133 730 Pfam SET domain 571 692 IPR001214 GO:0005515
Aed4g0133 730 ProSiteProfiles Pre-SET domain profile. 455 556 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aed4g0133 730 MobiDBLite consensus disorder prediction 126 205 - -
Aed4g0133 730 Pfam Pre-SET motif 407 551 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aed4g0133 730 SMART set_7 559 698 IPR001214 GO:0005515
Aed4g0133 730 Pfam Ubiquitin-binding WIYLD domain 6 59 IPR018848 GO:0018024
Aed4g0133 730 Gene3D SET domain 406 718 IPR046341 -
Aed4g0133 730 Gene3D - 1 60 IPR043017 -
Aed4g0133 730 ProSiteProfiles SET domain profile. 559 692 IPR001214 GO:0005515
Aed4g0133 730 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 726 IPR025776 -
Aed4g0133 730 SMART preset_2 403 543 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aed4g0133 730 MobiDBLite consensus disorder prediction 128 148 - -
Aed4g0133 730 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 1 729 - -
Aed4g0133 730 SUPERFAMILY SET domain 400 701 IPR046341 -
Aed4g0133 730 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0133 Aed-Chr4 981677 988652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0133 405 716 Su(var)3-9 homologs AT1G73100 29.878 4.49e-28 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aed4g0133 Pre-SET 1.9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0133 - - gmx:100809678 1248.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0133 4 981677 988652 Aed4g0133 4 981677 988652 ECH
Aed8g0965 8 8403907 8409930 Aed4g0133 4 981677 988652 PCT