Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0126 ATGAAAATCCACATTTTCATCTTCTTCTGTTACATTGGTTGTTTCTCTTATGGTTTTGCTGCTGCTGCCACAAATGATGAAGTATCAGCTTTGCTTGCTATAAAAGCAGGTCTCATTGACCCGTTGAACACCCTTCAGGATTGGAAACTGCATGACAAAGCACCAGGAGAGGATGCAACTCATTGCAACTGGACCGGCATCAAATGCAACTTAGCTGGAGCTGTAGAGAAGCTTGATCTCTCCCACAAGAATCTCAGTGGAAGAGTATCCAATGATATACAAAGACTTAAGAGTCTTACTTCCCTTAACTTGTGTTGCAATGCATTTTCAACGCCATTGCCAAAATCCATAGCCAATCTCACCACACTCAAAAGCCTTGATGTAAGCCAAAATTTCTTCATTGGTGACTTTCCATTAGGCCTTGGAAGGGCATGGAGACTTGTGGCCTTAAATGCATCCAGCAATGAGTTCTCAGGTTCTCTTCCCGAGGACCTTGCAAATGCCTCTTCCTTGGAGATGCTTGATCTCAGAGGCAGCTTCTTTGTAGGGTCAGTTCCAAAATCGCTCAGTAACTTGCATAAGTTGAAGTTCCTTGGTCTATCAGGAAATAATCTCACTGGAAAAATTCCTGGAGAGCTGGGACAACTTTCATCACTGGAGAATATGATCCTTGGATATAATGAATTTGAAGGTGGCATTCCAGAAGAGTTTGGCAACCTCACCAATCTTAAGTACCTTGATTTAGCAGTAGCCAATCTTGGTGGTGAGATTCCAGGGCCATTGCCTAGTAACCTTGGCAAGAATTCACCATTACAATGGTTGGATGTGTCATCCAACTCACTTTCTGGAGAGATTCCAGAAACTCTTTGCAGCCAGGGAAATCTCACCAAGCTCATACTATTCAACAATGCCTTCACTGGTCCAATTCCATCAAGTCTATCAATGTGTCCTTCACTCGTTCGGGTTCGAATTCATAACAATTTTCTTTCTGGGATGGTTCCTGTGGGTCTTGGCAAGCTTGGGAAGCTTCAAAGGTTAGAATTAGCTAACAATAGTCTTTCTGGTGGAATACCAGATGACATTGCTTCTTCCACATCTCTTTCCTTCATTGATCTCTCAAGAAACAAACTCCATTCTTCTCTTCCTTCCACTGTTCTTTCTATTCCAAACCTGCAAGCTTTCATGGTCTCCAACAACAACTTGGAAGGTGAAATCCCAGAACAATTCCAGGACTGTCCATCACTTGCAGTTCTTGATCTCTCATCAAATCATCTATTTGGAAGCATTCCAGAAAGCATTGCTTCATGTCAGAAGTTGGTAAATTTGAACCTCCAAAACAACCAATTGACTGGTGAAATTCCAAAAGCATTAGCTAAGATGCCTACACTTGCAATGCTTGATCTTTCCAACAATTCTCTGACAGGCCAAATACCTGAAAGCTTTGGAATTTCTCCAGCCCTGGAAGCACTCAATGTCTCATACAATAAGCTAGAAGGTCCAGTCCCAGCAAATGGAATACTAAGAACTATAAATCCAAATGATCTTCAGGGAAATGCTGGCCTATGTGGTGGTATCCTCCTTCCATGTGACCAAAACTCTGCATACTCTTCAAGGCACGGAAGCTTGCGTGCAAAGCACATCATTACAGCATGGATCACTGGAATATCTGCAATCCTAGTCATTGGGATTGCAGTTGTGGTTGCAAGATCTTTGTACATAAGGTGGTACACCGACGGGTTTTGCTTCCGAGAAAGATTCTATAAGGGTAGCAAAGGGTGGCCTTGGAGATTGATGGCATTTCAAAGGCTTGGTTTTACTAGTACTGACATTCTAGCTTGCATCAAGGAAACAAATGTGATTGGAATGGGAGCCACAGGGGTTGTTTACAAAGCTGAGATACCACAATCAAACACAATTGTGGCAGTGAAAAAATTGTGGAGAACAGGAACTGATATTGAAGTAGGAAGCAGTGATGACCTTGTGGGGGAAGTGAATGTTTTAGGGAGGCTCAGGCATAGGAACATTGTTAGACTATTAGGATTTCTTCACAATGACATTGATGTGATGATAATTAGAGACAACAAATCTCTAGAAGAAGCATTAGACCCAAGTGTAGGAAACAGCAGGCATGTTCTAGAAGAAATGCTTTTAGTTCTAAGAATAGCAATTCTTTGCACTGCCAAGCTCCCCAAGGACAGACCAACCATGAGGGATGTCATAATGATGCTTGGAGAGGCAAAGCCTCGGAGAAAGAGCAGTAGCAATAGCAATAGCAACACCGATGCAGCTAACAACAAAGAGACACCAGTTTTTAGCACATCACCAGTTAATAGCCTTGTGTAG 2343 0.4242 MKIHIFIFFCYIGCFSYGFAAAATNDEVSALLAIKAGLIDPLNTLQDWKLHDKAPGEDATHCNWTGIKCNLAGAVEKLDLSHKNLSGRVSNDIQRLKSLTSLNLCCNAFSTPLPKSIANLTTLKSLDVSQNFFIGDFPLGLGRAWRLVALNASSNEFSGSLPEDLANASSLEMLDLRGSFFVGSVPKSLSNLHKLKFLGLSGNNLTGKIPGELGQLSSLENMILGYNEFEGGIPEEFGNLTNLKYLDLAVANLGGEIPGPLPSNLGKNSPLQWLDVSSNSLSGEIPETLCSQGNLTKLILFNNAFTGPIPSSLSMCPSLVRVRIHNNFLSGMVPVGLGKLGKLQRLELANNSLSGGIPDDIASSTSLSFIDLSRNKLHSSLPSTVLSIPNLQAFMVSNNNLEGEIPEQFQDCPSLAVLDLSSNHLFGSIPESIASCQKLVNLNLQNNQLTGEIPKALAKMPTLAMLDLSNNSLTGQIPESFGISPALEALNVSYNKLEGPVPANGILRTINPNDLQGNAGLCGGILLPCDQNSAYSSRHGSLRAKHIITAWITGISAILVIGIAVVVARSLYIRWYTDGFCFRERFYKGSKGWPWRLMAFQRLGFTSTDILACIKETNVIGMGATGVVYKAEIPQSNTIVAVKKLWRTGTDIEVGSSDDLVGEVNVLGRLRHRNIVRLLGFLHNDIDVMIIRDNKSLEEALDPSVGNSRHVLEEMLLVLRIAILCTAKLPKDRPTMRDVIMMLGEAKPRRKSSSNSNSNTDAANNKETPVFSTSPVNSLV 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0126 780 Pfam Protein kinase domain 616 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0126 780 SUPERFAMILY L domain-like 23 290 - -
Aed4g0126 780 PANTHER UNNAMED PRODUCT 693 757 - -
Aed4g0126 780 MobiDBLite consensus disorder prediction 744 780 - -
Aed4g0126 780 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 259 692 - -
Aed4g0126 780 SUPERFAMILY L domain-like 258 523 - -
Aed4g0126 780 Gene3D Ribonuclease Inhibitor 23 177 IPR032675 -
Aed4g0126 780 Gene3D Ribonuclease Inhibitor 178 258 IPR032675 -
Aed4g0126 780 MobiDBLite consensus disorder prediction 749 780 - -
Aed4g0126 780 ProSiteProfiles Protein kinase domain profile. 614 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0126 780 PANTHER UNNAMED PRODUCT 5 258 - -
Aed4g0126 780 Gene3D Ribonuclease Inhibitor 259 533 IPR032675 -
Aed4g0126 780 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 693 757 - -
Aed4g0126 780 SUPERFAMILY Protein kinase-like (PK-like) 615 691 IPR011009 -
Aed4g0126 780 PANTHER UNNAMED PRODUCT 259 692 - -
Aed4g0126 780 Pfam Leucine rich repeat 317 377 IPR001611 GO:0005515
Aed4g0126 780 Pfam Leucine rich repeat 438 497 IPR001611 GO:0005515
Aed4g0126 780 Gene3D Phosphorylase Kinase; domain 1 606 693 - -
Aed4g0126 780 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 258 - -
Aed4g0126 780 ProSitePatterns Protein kinases ATP-binding region signature. 620 644 IPR017441 GO:0005524
Aed4g0126 780 Pfam Leucine rich repeat N-terminal domain 25 70 IPR013210 -
Aed4g0126 780 Pfam Leucine Rich Repeat 415 436 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0126 Aed-Chr4 932865 936121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0126 691 780 Receptor kinase-like Gene Family AT1G08590 54.945 7.09e-22 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aed4g0126 Pkinase 7.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0126 - - gmx:100811284 898.656