Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0122 ATGGCCGTCGATGAAACTGAAATCTTGTCTCTTTCTTCTTCTTTGGGATCGTTTGAGACCCTTTGGAGTGCGATCCTCGGATTGCCTTTGCTGGAACTGGTGGCAATCTGTGCCAACTTGACACTGTTTCTTCTCTTTCTCTTCGCTGTTTTGGCGAGGAAGGTGCTTATGTGTGTCGGGGGAGGAGTTAGATTTGGTAAGGAGAACAGAACCGGCAATGCCAGCCCCGTTTGTGATAGTGTTGATTTGGAAACACGTGACGTTCGGGTTGGAACGTGGTTCAAGTTGTCGGTGTTCTCTTGTTTCTATGTTCTCTTGGTGCAAGTTTTGGTCTTGGGGTTTGATGGGATTGCCTTTTTTAAGGAAGGGGTTGTGGATTTGGATTGGGATTTGGCTCTTCTTTCTGTGCCTCTTGTGCAGGGTTTAGCTTGGTTTGTGTTGAGCTTCTCGGCTCTGCAATGTAAGTTCAAGGCGCGTGAGAGGTTTCCACTTTTGCTCAGAGTTTGGTGGGTTGTGTTGTTTTTTATTTGTTTGTGTGGTTTGTATGTGGATGGGAGGGGGGTTTGGATGGAAGGTTCCAAGCACCTGCGCTCTCATGTTGTGGCGAATTTTGCTGTCACTCCTGCTATTGCCTTTTTGTGTATTGTGGCAATTAGGGGTGTTACTGGTATAAAGGTTTTTAGGAGTTCTGAGGAGCAACAGCCATTGCTTGTTGAGGAAGAACCTGGGTGTCTCAAGGTTACTCCTTATAGTGATGCTGGACTGTTTAGCTTGACCACTTTGTCTTGGCTGAATCCACTTCTTTCCATTGGGGCAAAAAGGCCACTTGAGCTTAAGGACATTCCCCTTGTTGCGCCAAAAGATCGATCCAAGACAAATTATAAGGTTTTGAATTCTAATTGGGAGAGATTGAAGGCTGAAAACCAATCCGGGCAGCCTTCGTTGGCTTGGGCGCTTCTCAAGTCATTCTGGAAGGAGGCGGCTTGTAACGCCATATTTGCTGGTGTCACTACTCTTGTCTCGTATGTTGGTCCATACATGATAAGTTACTTTGTTGATTACTTAGTTGGCAAAGAGATTTTCCCACATGAGGGGTATGCCCTTGCAGGGATATTCTTTGTGGCTAAGCTTGTGGAGACCTTGACTACTAGGCAGTGGTATCTAGGGGTGGACATCTTGGGTATGCATGTTAGGTCGGCTCTAACTGCAATGGTATATCGAAAGGGGCTAAGGATATCAAGCTTGGCCAAGCAAAGTCACACGAGTGGGGAGGTTGTTAACTATATGGCTATTGATGTTCAGAGGGTTGGGGACTACTCTTGGTATCTTCATGACATGTGGATGCTTCCTCTGCAGATTGTTCTTGCCCTTGCAATTTTGTATAAGAATGTTGGAATTGCAGCTTTTGCAACGCTGATTGCTACAATAATTTCCATTGTTGTCACTGTTCCCGTGGCTAGGATCCAAGAAAATTATCAAGACAAATTAATGGCTGCTAAGGATGAAAGGATGAGAAAAACATCCGAGTGCCTGAGGAATATGAGGATTCTCAAACTTCAAGCCTGGGAGGACAGATATAGAGTGAAATTGGAGGAAATGCGTGGAGTAGAGTTCAAGTGGCTTCGGAAAGCCCTCTACTCTCAGGCTTTCATAACTTTCATATTCTGGAGCTCCCCTATATTTGTTTCGGCAGTCACTTTTGCTACTTGCATATTGTTGGGTGGCCAGCTGACTGCTGGTGGTGTACTTTCTGCTCTGGCTACTTTCAGGATCCTGCAAGAACCTTTGAGGAATTTCCCAGACTTGGTGTCAACAATGGCTCAGACAAAGGTTTCTCTTGACCGGTTATCTTGTTTCCTGCTGGAGGAAGAATTGCAGGAAGATGCAACTATTGTCTTGCCACAAGGCATTACTAACATTGCTATAGAAATTAATGATGGTGTCTTCTGTTGGGACCCTTCTTTGTCTTGTAGGCCTACCCTATCAGGGATAAGTATGAAAGTTGAAAGACGGATGCGTGTAGCTGTTTGTGGTATGGTTGGATCAGGGAAATCAAGTTTTCTTTCTTGCATCCTTGGAGAGATTCCTAAGCTTTCTGGTGAAGTCAGAGTGTGTGGCTCTTCTGCATATGTCTCCCAATCAGCATGGATACAATCAGGAACTATAGAAGAAAATATCCTCTTTGGAAGCCCAATGAACAAAGCAAAGTACAAGAATGTTCTTCATGCTTGTTCTCTGAAAAAGGACCTAGAACTTTTCTCACATGGTGATCAGACAATTATTGGAGATAGAGGTATAAACCTGAGTGGTGGCCAGAAGCAGCGGGTTCAGCTTGCACGAGCACTCTACCAAGATGCTGATATTTATCTTCTTGATGATCCCTTCAGTGCAGTTGATGCTCACACAGGATCAGACTTGTTTAGGGAGTATATATTGACAGCACTAACAGATAAAACAGTCATTTATGTGACCCATCAAGTTGAATTTCTTCCCGCTGCTGATTTGATACTGGTTCTTAAAGAAGGCTGCATCATACAAGCAGGAAAGTATGACGATCTTTTACAAGCAGGAACAGATTTTAATACTCTGGTTTCAGCTCACCATGAAGCCATAGAGGCTATGGATATCCCTACTCACTCCTCAGAAGATTCAGATGAAAATTTATCCCTGGAGGCATCTGTTATGACCAGTAAGAAATCCATTTGTTCTGCAAATGATATAGACAGTTTGGCAAAGGAAGTGCAAGAGGGATCATCTACTTCAGATCCAAAAGCAATTAAGGAGAAGAAGAAGAAAGCAAAGCGATCAAGAAAGAAGCAGCTTGTTCAGGAAGAGGAGAGGATTAGAGGTAGAGTCAGCATGAAGGTGTATTGGTCATACATGGCAGCAGCATATAAAGGCTTATTGATTCCACTCATAATCATTGCACAAACATTATTTCAGTTCCTTCAGATTGCTAGCAATTGGTGGATGGCTTGGGCTAACCCTCAAACAGAAGGAGACCTGCCCAAAGTAACTCCCTCAGTTCTTCTTCTTGTTTACATGGCCCTTGCTTTTGGCAGCTCATGGTTTATATTTGTAAGGGCTGTTTTGGTGGCTACATTTGGTCTTGCAGCTGCACAGAAGCTATTTTTGAAAATGCTTAGAAGTGTTTTCCATGCACCAATGTCTTTCTTTGACTCTACACCAGCTGGAAGGATCTTGAATCGGGTATCAATTGATCAAAGTGTTGTGGATCTTGACATTCCTTTTAGACTTGGTGGGTTTGCTTCAACAACAATACAGCTTATTGGTATTGTTGGTGTGATGACAGAAGTTACATGGCAAGTTTTGCTCTTAGTTGTCCCAATGGCTGTTGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCCTCAAGGGAACTGGTTCGTATTGTTAGCATCCAGAAGTCTCCAATTATAAATCTTTTTGGTGAATCAATTGCTGGAGCATCCACCATCAGAGGTTTTGGACAAGAAAAAAGGTTCATGAAGCGGAACCTCTATCTTCTTGATTGCTTTGCACGACCATTCTTCTGCAGCATGGCTGGACTTGCTGTGACGTATGGCCTGAATTTAAATGCACGCCTATCACGGTGGATACTCAGCTTTTGCAAACTTGAAAATAAAATTATATCTATTGAGAGAATTTATCAGTACAGCCAAATTCCTAGTGAAGCACCCACAATTATTGAAGACTATCGCCCTCCATCCTCATGGCCGGAAAATGGGACGATTGAACTAATTGATTTGAAGGTCCGTTACAAGGAGAATCTTCCTTTGGTGCTTCATGGAGTAACATGCACATTTCCTGGTGGAAAGAAGATTGGAATAGTTGGACGTACTGGCAGTGGAAAATCTACTTTAATTCAGGCATTATTTCGATTGATTGAACCAGAAAGTGGGAGTATCCTTATAGACAACATTAATATATCAGAGATTGGCCTTCATGACCTTCGAAGCCATCTCAGTATCATACCACAAGATCCAACCTTATTTGAAGGGACCATTCGAAACAATCTTGATCCTCTACATGAGCACTCAGATAAAGAGATTTGGGAGGCACTTGATAAGTCTCAGCTTGGAGAGGTTATCCGTGAGAAAGGACAAAAACTTGATACACCAGTTCTAGAAAATGGAGATAATTGGAGTGTAGGACAGCGACAACTTGTTGCTCTGGGACGAGCTCTGCTGCAGCAGTCAAGAATACTTGTACTGGATGAAGCAACGGCGTCAGTTGATACCGCCACGGATAATCTTATCCAGAAGATTATCCGAAACGAGTTCAGAGACTGCACTGTTTGCACCATTGCTCATCGTATACCTACTGTCATCGACAGTGATCGAGTTCTTGTGCTCAGTGATGGCCGAGTTGCAGAGTTTGATACTCCTTCAAGATTATTAGAGGAGAAGTCATCCATGTTTCTGAAGTTGGTGACCGAGTATTCATCACGTTCAAGTGGTATACCAGAATTTTAG 4497 0.4325 MAVDETEILSLSSSLGSFETLWSAILGLPLLELVAICANLTLFLLFLFAVLARKVLMCVGGGVRFGKENRTGNASPVCDSVDLETRDVRVGTWFKLSVFSCFYVLLVQVLVLGFDGIAFFKEGVVDLDWDLALLSVPLVQGLAWFVLSFSALQCKFKARERFPLLLRVWWVVLFFICLCGLYVDGRGVWMEGSKHLRSHVVANFAVTPAIAFLCIVAIRGVTGIKVFRSSEEQQPLLVEEEPGCLKVTPYSDAGLFSLTTLSWLNPLLSIGAKRPLELKDIPLVAPKDRSKTNYKVLNSNWERLKAENQSGQPSLAWALLKSFWKEAACNAIFAGVTTLVSYVGPYMISYFVDYLVGKEIFPHEGYALAGIFFVAKLVETLTTRQWYLGVDILGMHVRSALTAMVYRKGLRISSLAKQSHTSGEVVNYMAIDVQRVGDYSWYLHDMWMLPLQIVLALAILYKNVGIAAFATLIATIISIVVTVPVARIQENYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRVKLEEMRGVEFKWLRKALYSQAFITFIFWSSPIFVSAVTFATCILLGGQLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRLSCFLLEEELQEDATIVLPQGITNIAIEINDGVFCWDPSLSCRPTLSGISMKVERRMRVAVCGMVGSGKSSFLSCILGEIPKLSGEVRVCGSSAYVSQSAWIQSGTIEENILFGSPMNKAKYKNVLHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSDLFREYILTALTDKTVIYVTHQVEFLPAADLILVLKEGCIIQAGKYDDLLQAGTDFNTLVSAHHEAIEAMDIPTHSSEDSDENLSLEASVMTSKKSICSANDIDSLAKEVQEGSSTSDPKAIKEKKKKAKRSRKKQLVQEEERIRGRVSMKVYWSYMAAAYKGLLIPLIIIAQTLFQFLQIASNWWMAWANPQTEGDLPKVTPSVLLLVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFLKMLRSVFHAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLIGIVGVMTEVTWQVLLLVVPMAVACLWMQKYYMASSRELVRIVSIQKSPIINLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPTIIEDYRPPSSWPENGTIELIDLKVRYKENLPLVLHGVTCTFPGGKKIGIVGRTGSGKSTLIQALFRLIEPESGSILIDNINISEIGLHDLRSHLSIIPQDPTLFEGTIRNNLDPLHEHSDKEIWEALDKSQLGEVIREKGQKLDTPVLENGDNWSVGQRQLVALGRALLQQSRILVLDEATASVDTATDNLIQKIIRNEFRDCTVCTIAHRIPTVIDSDRVLVLSDGRVAEFDTPSRLLEEKSSMFLKLVTEYSSRSSGIPEF 1498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0122 1498 CDD ABC_6TM_ABCC_D1 329 616 IPR044746 GO:0140359
Aed4g0122 1498 CDD ABCC_MRP_domain1 642 842 - -
Aed4g0122 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1244 1482 IPR027417 -
Aed4g0122 1498 SMART AAA_5 670 851 IPR003593 -
Aed4g0122 1498 SMART AAA_5 1278 1463 IPR003593 -
Aed4g0122 1498 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1252 1486 IPR003439 GO:0005524
Aed4g0122 1498 Gene3D - 1235 1488 IPR027417 -
Aed4g0122 1498 Coils Coil 489 509 - -
Aed4g0122 1498 Gene3D - 624 886 IPR027417 -
Aed4g0122 1498 SUPERFAMILY ABC transporter transmembrane region 316 616 IPR036640 GO:0005524|GO:0016021
Aed4g0122 1498 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 972 1198 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed4g0122 1498 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1187 1498 - -
Aed4g0122 1498 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 96 1189 - -
Aed4g0122 1498 Pfam ABC transporter 661 795 IPR003439 GO:0005524
Aed4g0122 1498 SUPERFAMILY ABC transporter transmembrane region 957 1232 IPR036640 GO:0005524|GO:0016021
Aed4g0122 1498 Gene3D ABC transporter type 1, transmembrane domain 892 1211 IPR036640 GO:0005524|GO:0016021
Aed4g0122 1498 Gene3D ABC transporter type 1, transmembrane domain 300 623 IPR036640 GO:0005524|GO:0016021
Aed4g0122 1498 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 331 608 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed4g0122 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 638 865 IPR027417 -
Aed4g0122 1498 MobiDBLite consensus disorder prediction 913 940 - -
Aed4g0122 1498 Pfam ABC transporter 1269 1417 IPR003439 GO:0005524
Aed4g0122 1498 CDD ABCC_MRP_domain2 1250 1470 - -
Aed4g0122 1498 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1187 1498 - -
Aed4g0122 1498 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 96 1189 - -
Aed4g0122 1498 CDD ABC_6TM_ABCC_D2 970 1227 IPR044726 GO:0140359
Aed4g0122 1498 Pfam ABC transporter transmembrane region 972 1173 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed4g0122 1498 Pfam ABC transporter transmembrane region 332 596 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed4g0122 1498 ProSitePatterns ABC transporters family signature. 768 782 IPR017871 GO:0005524
Aed4g0122 1498 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 642 866 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0122 Aed-Chr4 896589 906584 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0122 652 859 Calmodulin-binding Proteins AT2G36910 31.278 3.82e-19 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0122 - - gmx:100790550 2712.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0122 4 896589 906584 Aed4g0122 4 896589 906584 ECH