Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0118 ATGGAGGGTGGTGAGGGCATTTTCAAAGCAGGAAGTAGGAGGAAAAGTGATGCAGATTCAGTCTTCTCCAACTCTTTTCACAGAGAAGATGATGAAGAAGCTCTTAAATGGGCTGCGATTCAGAAGCTTCCCACGGTTTCGCGCTTGCGAAAAGGCTTGCTGACTAACCCAGAAGGGAAGGCTAGTGAAATTGATATACACAAACTTGGGTTGCAAGAAAGGAGAGCTTTGCTTCAAAGACTCGTTGCAAATGCTGAAATGGACAATGAGAATTTCTTGTTAAAACTCAGGAATCGAATTGATAGAGTTGGAGTTGATATTCCTACAATTGAAGTTAGATTTGAGAACTTAAAGGTTGAAGCAAATGTTCATGTAGGAAGCAGAGCTTTGCCCACTCTCACCAACTATATGGTTAATATAGTAGAGGGAATGCTGAAGTCTATGTTTAGAAGTGGAAGGCAAAATATGAATATTCTCCAGGATGTTAGTGGAATATTAAAGCCTTCCAGAATGACATTGCTTTTGGGGCCTCCAAGTTCTGGAAAGACCACACTCCTCTTGGCCTTGGCTGGAAAACTTGATCCAAACCTAAAGTTCAATGGAAAGGTGACTTATAATGGTCATGAGATGAATGAATTTGTACCCCAGCGAACGGCTGCATATGTCAGTCAAAATGATCTTCATATTGGAGAAATGACTGTCAGAGAAACCTTAGCCTACTCAGCCAGATTCCAAGGTGTTGGGCATGGATATGATATACTAGCAGAGGTGTCTAGAAGAGAGAAAGAAGCAAATATTGTCCCCGATCTAGATATTGATATCTATATGAAGATTCTAGGACTGGAAATCTGTGCAGATATTGTTGTGGGAAATGCCATGTTAAGAGGTATCTCTGGTGGACAAAAGAAACGTGTTACAACAGGGGAGATGTTGGTTGGTCCAGCTAAAGCTCTATTCATGGATGAAATATCTACTGGTTTGGATAGCTCAACAACATTTCAAGTTTTGAAATCAATTAAGCAATATGTGCTCATTCTCAAAGGGACTGCTGTGATTTCACTCCTGCAGCCACCACCAGAGACATACAATCTTTTTGATGACCTTATTCTACTCTCTGATGGACATATTGTGTACCAGGGTCCATGTGAACATGTGCTTGAGTTTTTTGCTTCAATGGGTTTTAGATGTCCAGAGAGGAAAGACGTGGCAGACTTTTTGCAAGAAGTAACATCAATGAAAGATCAGGAGCAATATTGGGAAAACAAAGAAAGACCATATAGATTTATCACAGCCAAAGAGTTTGCAGAGGCATTTCAATCATCTGATGTTGGGAGAAGCCTTGGTAATGAACTTTCTACTCAATTTGACAAGTCAAAAAGCCACCCTGCTGCTTTGGCAACCAACATGTATGGGTTGGGGAAGTGGGAATTGTTCAAAACTTGCTCATCAAGGGAGTATTTACTCATGAAGCGCAATTCATTTTTCTACATCTTCAAACTTTGCCAAGTTGCTGTGGCAGCGACTCTTACCATGACCGTTTTTCTGCGGACTGAAATGCACCGAAATTCAGTAGCCGATGGAGACATTTATTCCGGTGCATTGTTCTTCGGTGTCGTTGTAATTGTGTTGAATGGATTTTCTGAACTTCCTATGACAGTAGCGAGGCTTCCCATTTTTTACAAGCAAAGGGACCTTCACTTCTTCCCTTCATGGGCATATGCTCTTCCTTCGTGGATCCTCAAGATCCCTATAGCAATTGCAGAAGTGGGTGTGTGGGTGTTCCTTACCTATTTTGTCATCGGTTTTGATCCAGATGCTGGAAGATTCTTTAGGCAATTCCTCCTTCTATTTTTTGTCCACCAAATCGCTTCAGGGTTATTTCGAATACTTGGAGCAATTGGTAGAGAACAGTCAGTGGCTGCCACACTTGGGTCGTTTGCATTTCTCATACTTCTTTCCTTGGGTGGTTTCACCTTGTCCAAAGACAATATAAAAAAAGGGTGGATATGGGGATTCTGGATATCACCGTTGATGTATGCACAAAATGGCATAATGAATAACGAATTCCTAGGGAAGTCATGGAGACATGTTATGCCAAACTCAACAGAACTGCTAGGAGTTGAAGTTCTGAAATCCCACGAGTTTTTCACACAGTCTTACTGGTATTGGATATGCATTGGGGCATTGATAGGGTTCACAATACTGTATAACGTTGCTTACATGCTTGCTCTCACTTACTTGAACCCACTTGAGAAACATCAAGCTGTTAAATCAAAGCAATCTTTGAGCAATGAAGACAATGCGAGAAGCCACTCAGTGGAGACTAAAGAATACAACAAAAGAGGAATGGTTCTTCCATTTGAACCATATTCCATCACCTTTGATGAAGTTACATATTCAGTTGACATGCCCCAGGAAATGAGGAAGCAGGGTGTTGTTGAGCATAAGTTGGGTCTTTTGAAGGGTATCAGTGGAGCATTCAGGCCAGGTGTCCTCACTGCGCTAATGGGCATCACTGGTGCCGGCAAAACAACTTTGTTAGATGTACTTGCTGATAGAGATGGTAGAGAACCTACCTAA 2580 0.4159 MEGGEGIFKAGSRRKSDADSVFSNSFHREDDEEALKWAAIQKLPTVSRLRKGLLTNPEGKASEIDIHKLGLQERRALLQRLVANAEMDNENFLLKLRNRIDRVGVDIPTIEVRFENLKVEANVHVGSRALPTLTNYMVNIVEGMLKSMFRSGRQNMNILQDVSGILKPSRMTLLLGPPSSGKTTLLLALAGKLDPNLKFNGKVTYNGHEMNEFVPQRTAAYVSQNDLHIGEMTVRETLAYSARFQGVGHGYDILAEVSRREKEANIVPDLDIDIYMKILGLEICADIVVGNAMLRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQVLKSIKQYVLILKGTAVISLLQPPPETYNLFDDLILLSDGHIVYQGPCEHVLEFFASMGFRCPERKDVADFLQEVTSMKDQEQYWENKERPYRFITAKEFAEAFQSSDVGRSLGNELSTQFDKSKSHPAALATNMYGLGKWELFKTCSSREYLLMKRNSFFYIFKLCQVAVAATLTMTVFLRTEMHRNSVADGDIYSGALFFGVVVIVLNGFSELPMTVARLPIFYKQRDLHFFPSWAYALPSWILKIPIAIAEVGVWVFLTYFVIGFDPDAGRFFRQFLLLFFVHQIASGLFRILGAIGREQSVAATLGSFAFLILLSLGGFTLSKDNIKKGWIWGFWISPLMYAQNGIMNNEFLGKSWRHVMPNSTELLGVEVLKSHEFFTQSYWYWICIGALIGFTILYNVAYMLALTYLNPLEKHQAVKSKQSLSNEDNARSHSVETKEYNKRGMVLPFEPYSITFDEVTYSVDMPQEMRKQGVVEHKLGLLKGISGAFRPGVLTALMGITGAGKTTLLDVLADRDGREPT 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0118 859 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 10 854 - -
Aed4g0118 859 Pfam ABC transporter 159 323 IPR003439 GO:0005524
Aed4g0118 859 MobiDBLite consensus disorder prediction 1 20 - -
Aed4g0118 859 SMART AAA_5 168 382 IPR003593 -
Aed4g0118 859 Pfam ABC-transporter N-terminal 77 135 IPR029481 -
Aed4g0118 859 Pfam Plant PDR ABC transporter associated 694 756 IPR013581 -
Aed4g0118 859 Gene3D - 751 856 IPR027417 -
Aed4g0118 859 PANTHER ATP-BINDING CASSETTE TRANSPORTER 10 854 - -
Aed4g0118 859 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 398 IPR027417 -
Aed4g0118 859 Pfam ABC-2 type transporter 477 689 IPR013525 GO:0016020|GO:0140359
Aed4g0118 859 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 817 853 IPR027417 -
Aed4g0118 859 Pfam ABC-2 type transporter 356 438 IPR043926 GO:0140359
Aed4g0118 859 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 143 398 IPR003439 GO:0005524
Aed4g0118 859 Gene3D - 145 436 IPR027417 -
Aed4g0118 859 CDD ABCG_PDR_domain1 149 380 IPR034001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0118 Aed-Chr4 842020 850386 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0118 153 387 Calmodulin-binding Proteins AT2G36910 23.333 2.26e-06 49.7