Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0112 ATGAAAGCACTTATTGTAGATGACGACAGGGTCACCCAAAAAACTCATGAAGCGCTGTTGAAAAAAGTTGGGGTTAAAAATCACACTGCTGTTGAAAATGGCAAAAAAGCCGTGGAGCTTCATTTCAATGGTGAAAGATTTGACCTGATTCTCATGGATAAGGACATGCCTGTCATGGATGGAATTGAGGCAACAAAGAGACTTCGTTCAATGGGCATTGGTAGCATGATTGTTAGTGTGTCGTCGTCATTATGCGGTACAGAGAATGTTGAACAATTTATGAAAGCAGGGCTAGATGATTACTACACCAAACCCTTGACCGTTGATACGCTTAAAGCAATTCTTCATAAGATATGA 357 0.4034 MKALIVDDDRVTQKTHEALLKKVGVKNHTAVENGKKAVELHFNGERFDLILMDKDMPVMDGIEATKRLRSMGIGSMIVSVSSSLCGTENVEQFMKAGLDDYYTKPLTVDTLKAILHKI 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0112 118 CDD REC_hyHK_CKI1_RcsC-like 4 115 - -
Aed4g0112 118 Gene3D - 1 118 - -
Aed4g0112 118 SMART REC_2 1 115 IPR001789 GO:0000160
Aed4g0112 118 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 2 118 - -
Aed4g0112 118 Pfam Response regulator receiver domain 4 115 IPR001789 GO:0000160
Aed4g0112 118 ProSiteProfiles Response regulatory domain profile. 2 118 IPR001789 GO:0000160
Aed4g0112 118 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 118 - -
Aed4g0112 118 SUPERFAMILY CheY-like 1 118 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0112 Aed-Chr4 801492 801966 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0112 4 107 Response Regulator Gene Family AT3G04280 50.476 6.33e-27 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed4g0112 Response_reg 3.1e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0112 - - var:108322984 173.326