Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0111 ATGGCTGCAGCTCACACTTGCTCCGCCGCCGACCTCCACCCTCTTCTCGGAGGTGGCACGAATGCCACCGCAGCCGCGGAATTCATCTGCGGTCGTTTCGATGCCATCTCAAACAAGTTCGCCGACACCGCTTACGCCGTCGACACCACTTTCCTTCTCTTCTCAGCTTACCTCGTCTTCGTCATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGTTCCGTGCGCGCCAAGAACACCATGAACATCATGCTCACCAACGTCCTCGACGCCGCCACCGGCGGCATCTTCTTCTACGTGTTCGGCTTCGCCTTCGCCTACGGCACCCCCTCGAACGGTTTCATCGGAAAACACTTCTTCGGCCTCGACCAGTTCCCCTCCCCGAATTTCGACTACGGGTTTTTCCTCTACCAATGGGCATTCGCCATCGCCGCCGCGGGGATCACGAGCGGTTCCATCGCCGAGAGGACGCAGTTCGTTGCGTATTTGATATACTCTTCTGTTTTGACCGGTTTGGTGTACCCTATTGTGGCGCATTGGTTCTGGTGTGCTGATGGGTGGGGAAGCGCGGCTAGAACGGAGGGTTTGTTGTTTGGATCTGGTGTTATTGACTTTGCTGGGTCTGGTGTTGTGCATTTGGTTGGTGCTGTTGCTGGGTTTTGGGGTGCTTTGATTGAAGGCCCTAGGATTGGGAGGTTCGATCATGCCGGGAAGGCTGTGGCGATGAGGGGGCACAGTGGGACGTTGGTGGTGTTGGGGACATTCTTGTTGTGGTTTGGTTGGTATGGTTTCAACCCTGGATCGTTTCTCACCATTTTGAAGGCTTATAATGGATCAGACTTTGGTTCTTATTATGGCCAATGGAGTGCTGTTGGGAGAACTGCTGTCACAACAACCCTTGCTGGATGTTCGGCTGCACTCACTACACTCTTTGGGAAACGCGTGCAGACGGGGCATTGGAATGTCACTGATGTTTGCAATGGTTTGCTTGGTGGCTTTGCCGCCATCACAGCAGGGTGTGCGGTTGTGGACCCATGGGCTGCGATCATATGTGGGTTTGTGGCTGCATGGGTGCTGATTGGGTGCAACCTGCTGGCTGAGAAGTTGAAATACGATGACCCTCTTGAGGCTGCACAGCTTCATGGTGGGTGCGGCACGTGGGGGATTATCTTCGCTGCTTTGTCTGCTAAGAAAGAGTACGTGAACGAGGTTTATCCGGGGCTGCCAAACAGGCCTTATGGTCTTTTTATGGGAGGGGGTGGAAGGCTCTTGGCTGCACATGTTGTTCAGATTTTGGCCACAGTGGCTTGGGTGAGTGTCACAATGGGAGCAGTGTTCTTTGTGTTGCGTAAATTTGATCTGCTGAGGACAACACCTGATGAGGAGATGGAAGGGTTGGATGCAACCAGCCATGGTGGATTGGCGTATGAGTTTCACGAAAAGGATGAAATGAAACTCAGATTTGGTGAAGCAATCACTAATACTGTTTAA 1488 0.5349 MAAAHTCSAADLHPLLGGGTNATAAAEFICGRFDAISNKFADTAYAVDTTFLLFSAYLVFVMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFFYVFGFAFAYGTPSNGFIGKHFFGLDQFPSPNFDYGFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSVLTGLVYPIVAHWFWCADGWGSAARTEGLLFGSGVIDFAGSGVVHLVGAVAGFWGALIEGPRIGRFDHAGKAVAMRGHSGTLVVLGTFLLWFGWYGFNPGSFLTILKAYNGSDFGSYYGQWSAVGRTAVTTTLAGCSAALTTLFGKRVQTGHWNVTDVCNGLLGGFAAITAGCAVVDPWAAIICGFVAAWVLIGCNLLAEKLKYDDPLEAAQLHGGCGTWGIIFAALSAKKEYVNEVYPGLPNRPYGLFMGGGGRLLAAHVVQILATVAWVSVTMGAVFFVLRKFDLLRTTPDEEMEGLDATSHGGLAYEFHEKDEMKLRFGEAITNTV 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0111 495 SUPERFAMILY Ammonium transporter 45 455 - -
Aed4g0111 495 PANTHER AMMONIUM TRANSPORTER 1 482 - -
Aed4g0111 495 TIGRFAM amt: ammonium transporter 48 475 IPR001905 GO:0008519|GO:0016020|GO:0072488
Aed4g0111 495 Gene3D Ammonium transporter AmtB like domains 29 494 IPR029020 -
Aed4g0111 495 PANTHER AMMONIUM TRANSPORTER 1 482 - -
Aed4g0111 495 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Aed4g0111 495 Pfam Ammonium Transporter Family 51 475 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0111 Aed-Chr4 789280 790767 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0111 1 484 Inorganic Solute Cotransporters AT4G28700 75.770 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0111 K03320 - jre:109020544 800.816