Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0096 ATGGCACCTCAAAACATGGCCACGAAATTAACAGCACTTGTTGTAGATGACAACATACTCAACAGAAAGATTCATCAGAAGCTGTTGGAGAGTGTTGGAGTGAAAACTCAAGGAGTGGAAAATGGAAAAGAAGCAGTGGACATTCATTGCCATGGACAAAGATTTGACCTCATTCTCATGGACATGGATATGCCTATCATGAATGGCATTGAGGCAACAAAGGAACTTCGATCAATGGGCATTGGTAGCACGGTTGTTGGTGTGTCATCCCGCTGTACGGAAGCTGAAATACAAAATTTTATGGAAGCGGGGCTCAATGAATACCATGAAAAACCCTTGAACAATGCTAAGCTTAGTTCAATTCTTGATAAGTTCAACCCCAATTAG 387 0.416 MAPQNMATKLTALVVDDNILNRKIHQKLLESVGVKTQGVENGKEAVDIHCHGQRFDLILMDMDMPIMNGIEATKELRSMGIGSTVVGVSSRCTEAEIQNFMEAGLNEYHEKPLNNAKLSSILDKFNPN 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0096 128 Gene3D - 2 126 - -
Aed4g0096 128 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 127 - -
Aed4g0096 128 ProSiteProfiles Response regulatory domain profile. 11 126 IPR001789 GO:0000160
Aed4g0096 128 CDD REC_hyHK_CKI1_RcsC-like 13 122 - -
Aed4g0096 128 SMART REC_2 10 122 IPR001789 GO:0000160
Aed4g0096 128 Pfam Response regulator receiver domain 13 122 IPR001789 GO:0000160
Aed4g0096 128 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 4 127 - -
Aed4g0096 128 SUPERFAMILY CheY-like 9 124 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0096 Aed-Chr4 638446 639530 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0096 10 122 Response Regulator Gene Family AT3G04280 45.217 1.21e-28 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed4g0096 Response_reg 3.2e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0096 - - gmx:100794931 221.476