Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0095 ATGGAAGGTGGTCAGTTAACAGCACTTATTGTTGAGGATGATTTGGTGATCCGAATGGTTCATCGAAAGATGCTGAAGAGTGTTGGAGTGAAAATTGAAGTCGCGGAAAATGGAAAAGAAGCAGTAGAAATTCACCGCTCCGGACAAAGTTTTGACCTAATTCTCATGGATAGGGATATGCCTGTTATGAATGGCATCGAGGCGACAAAGACACTTCGATCAATGGGGATTAATAGCATGATAACTGGTGTATCAGCACGCACAGTAACAGCACACATACGAGAATTTATGGAAGCAGGACTAGATGACTACATAGAGAAGCCCTTGACCCTTCATAAGCTTACTTCCATCATTCACAAGATTAACAAATCAATTAAGTCAGATTAA 387 0.4083 MEGGQLTALIVEDDLVIRMVHRKMLKSVGVKIEVAENGKEAVEIHRSGQSFDLILMDRDMPVMNGIEATKTLRSMGINSMITGVSARTVTAHIREFMEAGLDDYIEKPLTLHKLTSIIHKINKSIKSD 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0095 128 SUPERFAMILY CheY-like 5 121 IPR011006 -
Aed4g0095 128 CDD REC_hyHK_CKI1_RcsC-like 9 118 - -
Aed4g0095 128 Gene3D - 2 127 - -
Aed4g0095 128 SMART REC_2 6 118 IPR001789 GO:0000160
Aed4g0095 128 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 125 - -
Aed4g0095 128 Pfam Response regulator receiver domain 9 118 IPR001789 GO:0000160
Aed4g0095 128 ProSiteProfiles Response regulatory domain profile. 7 122 IPR001789 GO:0000160
Aed4g0095 128 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 4 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0095 Aed-Chr4 630523 630989 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0095 6 118 Response Regulator Gene Family AT3G04280 46.087 1.56e-27 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed4g0095 Response_reg 7.2e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0095 - - gmx:100819813 187.963