Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0080 ATGACGTCGTTCTTGAAGCCTGAGAATGCTCTTAAAAGGGCGGAAGAATTAATCAATGTTGGGCAGAAGCAGGATGCTTTGCAGACTCTTCACGACCTCATTACGTCGAAGAGATACAGAGCATGGCAGAAGACACTTGAAAGGATTATGTTCAAGTATGTGGAACTTTGTGTAGATATGCGCAAAGGACGGTTTGCAAAAGATGGGCTTATCCAGTACAGGATTATATGCCAGCAAGTGAATGTTAGTTCCCTTGAGGAGGTGATCAAGCATTTCATGCATCTGTCAACCGAGAAAGCTGAACAAGCCCGTAGCCAGGCACAGGCACTAGAAGAAGCGCTTGATGTTGATGACTTAGAGGCAGATAAAAGGCCAGAGGATTTAATGTTAAGCTATGTCAGTGGTGAGAAAGGAAAGGACAGATCTGATCGGGAGCTTGTTACCCCATGGTTTAAATTTCTTTGGGAAACATACAGGACAGTGCTTGAAATATTGCGGAACAACTCAAAACTGGAAGCCTTATATGCGATGACAGCTCATCGAGCTTTCCAGTTCTGTAAGCAATATAAGCGAACAACAGAGTTCCGCAGGCTGTGCGAAATCATAAGAAACCATTTGGCTAATCTCAATAAATACCGTGACCAACGAGACCGACCTGATCTCTCAGCTCCTGAAAGCTTACAGCTCTATCTTGATACAAGATTTGAGCAGCTGAAAGTTGCCACTGAACTTGAACTCTGGCAGGAAGCCTTCAGATCAGTGGAGGATATACATGGACTGATGTGCTTGGTCAAGAAAACTCCAAAGCCATCTTTAATGGTTGTTTACTATGTGAAGCTCACAGAAATATTTTGGATATCATCAAGTCATCTGTATCATGCATATGCATGGTTCAAGCTTTTTTTATTACAAAAAAGCTTCAATAAGAATCTGAGTCAAAAGGATTTGCAATTAATAGCTTCGTCAGTTGTTCTGGCTGCAATTTCAGTGCCTCCTCATGATTGCTCCCACGGTGCATCTCATTTGGAATTGGAGCATGAAAAGGAGAGAAATTTGAGGATGGCTAATCTCATTGGCTTTAATCTTGAAACTAAGCCTGAAAGCAGAGAAATGGTATTTTGCTTCCCCTCAATTGTACCTCCTACTAAGCTCTCAAGGTCATCACTTCTTGCTGAACTGGCATCCAAGGGTGTGATGTCTTGTGTAACTCAAGAAGTGAAGGACATTTACCATCTTTTGGAACATGAATTTCATCCCTCAGATCTTGCAATAAAGGCGCTGCCCTTGATAACTAAAGTCTCAAAGTTAGGGGGCAAGCTTTCTACTGCGTCATCTGTTCCTGAAGTCCAATTATCTCAGTATGTTTCAGCTCTGGAAAGACTAGCTACCGTGAGGTTGCTGCAGCAGGTGTCTAATGTGTACCAGACAATGAAGATTGAGACCTTATCTGGGATGATCCCCTTCTTTGATTTTTCTGTAGTGGAAAAGATTTCTGTAGATGCTGTTAAGCAGAAGTTTGTATCGATGAAAGTAGACCATATGAAAAATGTTGTGATTTTTTGCAAAAAGAGTCTTGAGTCTGATGGCTTAAGGGATCACTTGGCCAATTTTGCTGAACAATTAAATAAGGCAAGACAAATGATTCATCCTCCTGATAGGAAACCATCTAAACTTGGAGCTTTACTTCCAACTTTGACAGAGGTTGTGGCCAAAGAACACAAGAGGCTTCTTGCTCGAAAATCAATTATTGAGAAGAGGAAAGAAGAACAAGAACGGCAGCTTCTTGAAATGGAACGGGAAGAGGAGTCAAAGAGGCTAAGACTTCAGAAAATAACTGAAGAAGCGGAACAAAGAAGGCTTGCCACTGAGTATGAGCAGAGGAAGAATCAGAGGATCCTCAGGGAGATAGAGGAGAGAGAAAATGAAGAAGCTCAAGCTTTGCTCCAGGAAGCTGAAAAACGTATAAAAAAGAAGGGGAAGAAACCAATCATAGAGGGGGAAAAAATTACCAAGCAGACCTTGATGGAGATGACTTTGACTGAACAACTCCGGGAAAGACAGGAAATGGAAAAGAAATTGCAGAAGTTAGCGAAAACCATGGATTATTTGGAAAGAGCAAAAAGAGAAGAGGCTGCTCCCCTGATTGAAGCTGCATATCAACAGCGTCTAGTGGAAGAGAGACTTCTGCATGAGCGTGAGCAACAGCAAGAGGTTGAACTGAGCAAGCAGAGGCATGAGGGAGATCTCAAGGAGAAGGAGAGGCTTATTCGAATGATGGGCAATAAGGAGATATATCAAGAGAGGGTTGTTGGTCAACGCCAAGCAGAGTTCAACAGATTGAGAAGAGAAAGGGAAGAGCGAATCTCTAGGATTTTACAGTCCAGGAGACAGGAGAGGGAAAAAATGAGGAAGTTGAAGTATTATCTCATGTTAGAAGAAGAGAGGCAACAAAAATTGCATGAGGAGGAGGAAGCTCGGAAACGTGAAGAGGCTGAAAGGAGAAAGAAGGAAGAGTCTGAACGCTTGCAAAAATTGGAGGAGATAGCTGAAAAGCAGAGGCAGAGAGAGAGGGAACTTGAAGAAAAAGAGAAACAAAGGAGAGAAGCATTGTTGGGTAGGGCTGTTGAACCAGCTCCTCCTGCCCGGCCATTGGAATCGGGATCTGCTGCTCCTGTTGCCTCTCCTGCTGCCGCTGCTGCTGCCTCTGCTGCTCCAGCATCTGGGAAATATGTCCCTAAGTTCAGACGAGACAGAACTGAAAGCACAGGAGCTGTGCCTCCTCCAGAAGCAGATCGCTGGAACAGTAGCAGCAGGCCAGATGGTGACAGATGGCGTAGTGATGATAGGAAAGCCGCGTTTGGTTCTAGTGGTGGAGGTTCAAGGTCATCTTCTACTTGGTCATCTTCCAGAAATGCCCGTTGA 2922 0.437 MTSFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSVEDIHGLMCLVKKTPKPSLMVVYYVKLTEIFWISSSHLYHAYAWFKLFLLQKSFNKNLSQKDLQLIASSVVLAAISVPPHDCSHGASHLELEHEKERNLRMANLIGFNLETKPESREMVFCFPSIVPPTKLSRSSLLAELASKGVMSCVTQEVKDIYHLLEHEFHPSDLAIKALPLITKVSKLGGKLSTASSVPEVQLSQYVSALERLATVRLLQQVSNVYQTMKIETLSGMIPFFDFSVVEKISVDAVKQKFVSMKVDHMKNVVIFCKKSLESDGLRDHLANFAEQLNKARQMIHPPDRKPSKLGALLPTLTEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLATEYEQRKNQRILREIEERENEEAQALLQEAEKRIKKKGKKPIIEGEKITKQTLMEMTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQQRLVEERLLHEREQQQEVELSKQRHEGDLKEKERLIRMMGNKEIYQERVVGQRQAEFNRLRREREERISRILQSRRQEREKMRKLKYYLMLEEERQQKLHEEEEARKREEAERRKKEESERLQKLEEIAEKQRQRERELEEKEKQRREALLGRAVEPAPPARPLESGSAAPVASPAAAAAASAAPASGKYVPKFRRDRTESTGAVPPPEADRWNSSSRPDGDRWRSDDRKAAFGSSGGGSRSSSTWSSSRNAR 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0080 973 MobiDBLite consensus disorder prediction 935 950 - -
Aed4g0080 973 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 453 544 - -
Aed4g0080 973 Pfam PCI domain 385 520 IPR000717 -
Aed4g0080 973 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 921 IPR027512 GO:0005852
Aed4g0080 973 MobiDBLite consensus disorder prediction 816 973 - -
Aed4g0080 973 Gene3D - 269 342 - -
Aed4g0080 973 Gene3D - 363 523 - -
Aed4g0080 973 SMART PINT_4 453 544 IPR000717 -
Aed4g0080 973 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 944 IPR027512 GO:0005852
Aed4g0080 973 Coils Coil 627 661 - -
Aed4g0080 973 MobiDBLite consensus disorder prediction 956 973 - -
Aed4g0080 973 Coils Coil 679 709 - -
Aed4g0080 973 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 921 - -
Aed4g0080 973 Coils Coil 573 614 - -
Aed4g0080 973 MobiDBLite consensus disorder prediction 816 871 - -
Aed4g0080 973 ProSiteProfiles PCI domain profile. 316 525 IPR000717 -
Aed4g0080 973 Coils Coil 93 120 - -
Aed4g0080 973 Coils Coil 808 869 - -
Aed4g0080 973 Gene3D UVR domain 217 268 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0080 1 970 Eukaryotic Initiation Factors Gene Family AT4G11420 71.386 0.0 1311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0080 K03254 - gmx:100782598 1518.44