Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0056 ATGAGAAAGTTGTGTTTTAACCCCAAGACGGCGTCGTTTGCGTTGGCCCGCAGTTCTCCTTCTTCGCCACTATCCTTAGCCTCAAGTCCTACGCCTCCTAGGCTGAGTTTTTCCGAACCTTGCAGCAGCTTCGTCGACGAAGAAGACAGATTCATCGACGAAGCTGAGGCTCTAATCCTGAAATGGAATCCTGACACTTCTGCTTACGCCAAAGTCACTTCCCTCTTCTACGAGGATAAAACCGAAGCCAAACACTACATTGACTGCGTCAACCAGCTTCAGAAAACCATGCATTCCTTGCTCTCTCAGAGCCCTTCCTCCGACAAACTCATCCTCGCTCATAACCTAATGCAGATGGCTATGAAGAGGCTCAAGAAAGAGTTCTACCAGATCTTATCCATGAATCGCGCTTACCTCGATCCCGAATCCGTCTCCGCTAGATCCTCTCGCACCTCCGCCAACTCCAGCGCCTCCGATTACGACGACGACTTCGCCGCGGAAGACGACGATATCCGTGCCGCCGGCGACTCTATCTCCGAAGTCGAGCAGGTTTCGTCCGATGCCATGATGGATCTGAAGTTAATCGCTGACTGCATGGTCTCTTCCGGTTATGCCAAAGAATGCGTCAGTGTTTACAACATCATCCGAAAATCCATCATTGACGAAGGAATCTACCGCCTCGGCGTTGAGAAACTAAGCTCTTCGCGCGCTAATAAGATGGCTTGGGAAGTACTTGATTTGAGGATCAAGAGTTGGTTAGAGGCGATACGGATTTCCGTTAGAACACTCTTCAACGGAGAGAGAATCCTCTGCGACCACGTCTTCAGTTACTCAGATTCCGTCAGAGAATCCTGCTTCGCCGAGATTTCAAGAGACGGTGCTTCTCTACTTTTCGGATTCCCCGAACTCGTCGCCAGAACTAAGAAATCAGCGCCGGAGAAGCTGTTCCGCGTGCTGGATATGCATGCTGTGGTTTCCGAACTGTGGCTGGAGATCGAGTCTATCTTTTCCTCCGATTACAACTCCGGTCTTCGTTCTCAAGTCCTCGCTTCGCTCCAACGACTCACTGAATCCGCGCAAATCTTGCTCTCGGAGTTCGAGTCCACGATCCAGAAGGACTCTTCCAAATCGGCGGTGAACAGCGGCGGCGTGCACTCGCTCACGATTCAGACGATGAATTACCTCGCACTCCTGGCCGATTACGTCAACGTGCTATCTGACATATTCCCTCACGACTGGCTTCCGCCGCCGAAGTCGTCATCGCTGCCGGAATCTTATTTATACAGTCCGGAGTCCGATTACTCGGCGTCGACGCCGGCGCTAACAGCGCGTTTTGCGTGGCTGATTCTCGTCCTCCTTTGCAAACTCGACGGCAAAGCAAAGCATTGCAAGGACGTTTCGCTGTCTTACCTGTTTCTCGCGAACAATCTCTGGTACGTGGTGGGGAGAGTCCGAAGCTCGAACCTGCAGTACGTACTTGGCGACGATTGGACCACAAAGCACGAAGCTAAGGCGAAAAGGTTCATTGCGAACTACGAGAAGGTGGCGTGGGGAGAAGTGGCTTCGTCATTGCCGGAAAATCCAGCCGCGGCGGAGGCTAGGGCGGTGTTTGAGAAGTTCAATATCAAATTCGAGGAAGCGTATCGGAAACAGAATTCTTTCGTGGTAGCTGACCGAGAATTACGAGACGAAATAAAAGGTTCGATCGCGAGAAGTATAATGCCAAGATATCGCGAGTGGTATAATGCGGTTCTTGCTACGGTGGGATCAGTGAGGGATTTGACGGTGACGGAGTATGTGACGTTTACCCCTAAGGATATTGAAAATTACTTGGCTAACCTATTCTTTTTTGGAAGAGCTTCCAGCGCTGTAACGTCGTCGTCGTCGTCGGTAACGTCGTCTCCTCTCCGGCGTTGGGGTTAA 1923 0.5133 MRKLCFNPKTASFALARSSPSSPLSLASSPTPPRLSFSEPCSSFVDEEDRFIDEAEALILKWNPDTSAYAKVTSLFYEDKTEAKHYIDCVNQLQKTMHSLLSQSPSSDKLILAHNLMQMAMKRLKKEFYQILSMNRAYLDPESVSARSSRTSANSSASDYDDDFAAEDDDIRAAGDSISEVEQVSSDAMMDLKLIADCMVSSGYAKECVSVYNIIRKSIIDEGIYRLGVEKLSSSRANKMAWEVLDLRIKSWLEAIRISVRTLFNGERILCDHVFSYSDSVRESCFAEISRDGASLLFGFPELVARTKKSAPEKLFRVLDMHAVVSELWLEIESIFSSDYNSGLRSQVLASLQRLTESAQILLSEFESTIQKDSSKSAVNSGGVHSLTIQTMNYLALLADYVNVLSDIFPHDWLPPPKSSSLPESYLYSPESDYSASTPALTARFAWLILVLLCKLDGKAKHCKDVSLSYLFLANNLWYVVGRVRSSNLQYVLGDDWTTKHEAKAKRFIANYEKVAWGEVASSLPENPAAAEARAVFEKFNIKFEEAYRKQNSFVVADRELRDEIKGSIARSIMPRYREWYNAVLATVGSVRDLTVTEYVTFTPKDIENYLANLFFFGRASSAVTSSSSSVTSSPLRRWG 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0056 640 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 622 - -
Aed4g0056 640 Pfam Exo70 exocyst complex subunit 250 612 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aed4g0056 640 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 622 IPR004140 GO:0000145|GO:0006887
Aed4g0056 640 Gene3D Exocyst complex component Exo70 68 622 - -
Aed4g0056 640 SUPERFAMILY Cullin repeat-like 52 615 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0056 Aed-Chr4 368842 370764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0056 52 615 EXO70 exocyst subunit family AT3G09520 55.304 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0056 K07195 - gmx:100786852 1021.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0056 4 368842 370764 Aed8g1267 8 15114956 15115360 PCT
Aed8g0345 8 2856147 2858030 Aed4g0056 4 368842 370764 PCT