Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0033 ATGGATTTTAAGGAAGCAGAAAGAGTGGTGATTGCAAAACCAGTTGCATCAAGGCCAACTTGTTCAACTTTCAGATCTTTCTCAGAGCTCCTAGCAGGTGCAATCGATGCTTCTCCCGATGTTGCTGCATCTTCTGAAGCTACAGTTTCTGCCATTAGACCGAAGACAGTGAGGTTCAAGCCAGCAGCACTGAATCAACCCACTGCTGCCTTTGTTTCTTCTCAGGCTGATACATTTGGAGCTGCACTCAGTAATAACTCTTCTGACACCAAGCATTCCCTCATATACAAACCGACGGCAAAACTCGTGTCAAAGACAACTGTGTCTCTTTTGGCGAATATGGGAAATTGCAGTACTAGTCAGCAACAAACGCAGCAGCAATCAATGGAGGCCAATTTTCAACATTTGATCCATGAAAAATATAGAAGCAACACGAGCTCAAATCTTGATCAGAGTATTACTATTACCCCGCAAACAGAAATAAAGATGGTGCAGCAGCAGCAGAACATAGAGGAGGAACAGCAGAAAGCATTAACATTAACATCCTCAGTGAATTGTGATAGACCTTCTTATGATGGATACAATTGGAGGAAATATGGTCAGAAGCAAGTGAAAGGGAGCGAGTACCCGCGAAGCTATTACAAGTGCACACATCCTAATTGTCCAGTGAAAAAAAAGGTTGAAAGATCGTTTGATGGGAACATTGCTGAGATTGTTTATAAAGGAGAACACAACCATTCGAAGCCGCAGCTTCCTAAGCGAAACTCAGCAGCAGCAGGGACGACACAAGGTAATAATGTTTCAGGGGTGGTGGTGTCTGATGGAATGATGGTTCAAGAAATGTGGAGTAATGAAGGCAGTGAAGTTAGAATTGAGAACAACACAGGTCTCTCTGTGCATTCAGATTATTATGTCAAAGTTCCACTGCCTAATGATCATGTTGGTGCTGGAGGAAGCACAGAAAACTCGTGTGGTCTAAGTGGGGATCAATGTGATGAAAGAAGTAAGGGATTTGAGCCACATGAAGATGAACCAAGAAGTAAAAGAAGGAAAAATGAGAATCAATACAATGAAGCAGCATTATCAGAGGAAGGTTTAGTGGAGCCACGGATTGTGATGCAAAGTTTCACGGATTCTGAAATACTTGGAGATGGCTTTCGCTGGAGGAAATATGGGCAGAAGGTGGTGAAAGGAAATCCATATCCCAGAAGTTACTATAGGTGTACTAGTATCAAGTGTAACGTTCGGAAACACGTGGAGAGAGCAATAGATGACCCAAGATCATTTGTGACTACATATGAGGGAAAGCACAATCATGAGATGCCACTGAAGAACACAGGAAATGTGGCCTCTGAAAGAGATTCACAGGCTTCTCTTAGTAAAGATAAACCATGA 1395 0.4258 MDFKEAERVVIAKPVASRPTCSTFRSFSELLAGAIDASPDVAASSEATVSAIRPKTVRFKPAALNQPTAAFVSSQADTFGAALSNNSSDTKHSLIYKPTAKLVSKTTVSLLANMGNCSTSQQQTQQQSMEANFQHLIHEKYRSNTSSNLDQSITITPQTEIKMVQQQQNIEEEQQKALTLTSSVNCDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGNIAEIVYKGEHNHSKPQLPKRNSAAAGTTQGNNVSGVVVSDGMMVQEMWSNEGSEVRIENNTGLSVHSDYYVKVPLPNDHVGAGGSTENSCGLSGDQCDERSKGFEPHEDEPRSKRRKNENQYNEAALSEEGLVEPRIVMQSFTDSEILGDGFRWRKYGQKVVKGNPYPRSYYRCTSIKCNVRKHVERAIDDPRSFVTTYEGKHNHEMPLKNTGNVASERDSQASLSKDKP 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0033 464 MobiDBLite consensus disorder prediction 332 357 - -
Aed4g0033 464 Pfam WRKY DNA -binding domain 192 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g0033 464 Pfam WRKY DNA -binding domain 384 440 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g0033 464 MobiDBLite consensus disorder prediction 435 464 - -
Aed4g0033 464 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 17 271 IPR044810 GO:0003700
Aed4g0033 464 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 335 453 IPR044810 GO:0003700
Aed4g0033 464 SUPERFAMILY WRKY DNA-binding domain 375 442 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed4g0033 464 MobiDBLite consensus disorder prediction 251 268 - -
Aed4g0033 464 MobiDBLite consensus disorder prediction 242 268 - -
Aed4g0033 464 Gene3D WRKY domain 368 443 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed4g0033 464 Gene3D WRKY domain 174 250 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed4g0033 464 SUPERFAMILY WRKY DNA-binding domain 189 249 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed4g0033 464 MobiDBLite consensus disorder prediction 314 362 - -
Aed4g0033 464 ProSiteProfiles WRKY domain profile. 377 442 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g0033 464 SMART WRKY_cls 382 441 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g0033 464 SMART WRKY_cls 190 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g0033 464 ProSiteProfiles WRKY domain profile. 192 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g0033 464 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 17 271 - -
Aed4g0033 464 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 335 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0033 Aed-Chr4 247203 252865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0033 85 443 WRKY Transcription Factor Family AT2G37260 45.576 1.23e-90 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed4g0033 WRKY 6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0033 - - gmx:100794069 717.613