Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0019 ATGGATGATGGAAAGGTATTATTGGAGGATGAGCTTGTGAGAGGGCGTGAGTTTGCTAATCAACTTGGACAAGTGATTAGTAGTGGAAAAGATGAGCACTCAACAAATCCATTAATTGTTGAAAATCTTGTCAATAACGTCATCAAATCCTTCACCAACACCCTCTTCCTCTTGGACAAGTATCCCTCTTACGAGATGCTTATTGCCACTACTAAATCTGAGGAAGAAAGTTGCACCATGAGTAAGAACAGAAGAGGGTGCTACAAGAGAAAAAGAACAACACAAGATCAATGGGAAGAGGTGTCGGAAACTCCAAAAGTGGATGGGCACCAATGGAGAAAGTATGGGCAAAAAGAGATCCTCAAAGCCAAATACTCAAGAAACTACTACAGGTGCAGTCACAAGTGTGATCAGAATTGTAAAGCAACAAAACAAGTGCAAAGAATTCAAGAGGATCCTCCAATGTATAAGACCACCTATTTCGGAAACCACACATGCAGCAATTATAACTCTGAAATCATACTTGATTCCAGTTGCAATAATATTTCTCCTTCTTCCATATTACTAAGCTTTAACAACACCAAACAAGACTACCCCTTTTTATCATCTTTTCCCTCAGAACCCACGTCCTTAGATCATCATTCTTTTCATGACGACCTTGATGATGATGTCAACCTTTTTTTGGATTTTGATCATTAA 699 0.3891 MDDGKVLLEDELVRGREFANQLGQVISSGKDEHSTNPLIVENLVNNVIKSFTNTLFLLDKYPSYEMLIATTKSEEESCTMSKNRRGCYKRKRTTQDQWEEVSETPKVDGHQWRKYGQKEILKAKYSRNYYRCSHKCDQNCKATKQVQRIQEDPPMYKTTYFGNHTCSNYNSEIILDSSCNNISPSSILLSFNNTKQDYPFLSSFPSEPTSLDHHSFHDDLDDDVNLFLDFDH 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0019 232 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 218 IPR044810 GO:0003700
Aed4g0019 232 SUPERFAMILY WRKY DNA-binding domain 104 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed4g0019 232 ProSiteProfiles WRKY domain profile. 108 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g0019 232 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 218 - -
Aed4g0019 232 Pfam WRKY DNA -binding domain 108 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g0019 232 SMART WRKY_cls 106 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g0019 232 Gene3D WRKY domain 92 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0019 Aed-Chr4 122278 123178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0019 5 181 WRKY Transcription Factor Family AT3G56400 36.735 2.06e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed4g0019 WRKY 1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0019 - - gmx:102670495 272.322