Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0015 ATGGAACTTAATGCCCAAAAAATTCCCCCCTGTGAAATTTCCCATCCTCGACGCAATAGGGTTCGTCCTAGAAGCAGCCTTCAATTTGATGATACCATCCTGTTACATGATGACAATGCCTGCCTCATCTATGTTAATGATCCCATCAAGACAAATGAAAATTGTGAGTTTGCAGGGAATCAGATACAAACCAGCAGATACAATCTTCTCACCTTCTTGCCCAAGAATCTTTTCATTCAGTTTCACCGAGTTGCTTATCTTTATTTCCTTGCTATTGCCGCTCTCAATCAACTTCCTCCACTCGCTGTTTTTGGACGAACTGTGTCCCTTTTCCCCCTCTTGACCGTGCTTTGTGTCACAGCTATCAAGGATGCCTATGAGGATTGGCGCAAACACATGTCTGATTGCAATGAAAATAATCGAGAGTGTATAGTTCTTCAATCGGCTAAGTTCCACCCCAAGAAATGGAAAAACATACAGGCTGGTGATGTTCTTAAAATCTCTGCCGATGAGATGATTCCTGCTGACATGGTCTTGTTGGGGACAAGTGATCTGAGTGGGATTGCCTATATTCAGACTATGAATTTGGATGGAGAATCGAATTTGAAGACAAGGTATGCTAAGCAGGAAACAACTTCAGTGGTGTTGTCAGACACTTGTACTGCCTCTGGAGTTATTAGATGTGAGCCACCTAATCGGAATATTTATGAGTTCACTGCCAACATGGAGTTCAATGGGAATAAGTTTCCCCTTAACCAGTCAAACATTGTGCTGCGTGGTTGCATGCTGAAGAACACAGATTGGATTGTTGGTGTGGTGGTTTATGCAGGACAACAAACAAAAGCAATGTTGAACAGTGCGGCTTCCCCTTCCAAGAGAAGCAAATTGGAAAGTTACATGAATAGAGAAACTGTTTGGTTGTCGGTTTTTCTTTTTATCATGTGTGCAGTTGTTGCTCTTGGGATGGATTTCTGGCTGCTACGCCACAAGGATCAACTTGATACCTTGCCTTACTACAGGAAAACATATTTCAACAATGGGCCGGATAAGGGAAAGAAATACAGGTATTATGGGATACCGATGGAAACATTCTTCTCCTTTCTGAGTTCTATTATAGTGTTTCAGATAATGATACCAATATCTCTATACATCACAATGGAGTTGGTTCGTTTGGGTCAGTCATACTTCATGATAGAGGATAAGGATATGTATGATGCTAACTCTGGATCAGGTCTCCAGTGTAGATCATTTAATATAAATGAAGATTTGGGTCAAATACGCTACGTGTTTTCAGACAAGACAGGAACACTAACAGAAAACAAAATGGAGTTTCAGAGAGCTACTGTACATGGAAAGAAATATGGGAGCTCCTTGCTTATGGATGACAAAAATAAAGCAACAACAAATGGTGCTAATCAAAGATGGAAGCTCAAATCTGAAATTGCTGTTGATTCTGAACTGATGGCATTGTTGCAGAAAGACTTAAATAGAGATGAAAGAATTGTTGCTCATGAGTTTTTCCTTACATTGGCTGCTTGTAATACTGTGATACCCATTATTAAGAGCAGTACATTTTCCAGTTGTGGAAAAGGAGAATCAAATGAACTCATAGAAGGTATTGATTACCAGGGAGAATCTCCTGATGAACAAGCTTTAGTTTCTGCTGCATCTGCATATGGATATACTCTATTTGAGAGAACATCTGGAAACATTGTTATTGACGTCAATGGCGAGAAACTCAGGTTGGATGTATTGGGCCTGCATGAGTTTGATAGTGTACGAAAAAGGATGTCTGTTGTTGTCCGATTTCCTGACAATGTTGTTAAGGTGTTGGTTAAAGGCGCTGACACTTCAATGTTAAGCATTTTAGCACCTGAGAATGTAGGCAACAACAACAGACGACATGAAACTCAGAGTCATTTAAGTGAATATTCTATGCAAGGTTTACGAACTCTTGTAGTTGCCTCCAGGGATCTTTCAGATGCCGAACTTGAGGAGTGGCAAAGCATGTATGAAGATGCAAGCACTTCATTGACTGGCCGATCTACAAAACTACGTCAAACAGCAACTCTTATAGAATGCAACCTAAAGTTACTTGGGGCAACTGCTATTGAGGACAAGCTGCAGGAGGGTGTACCAGAAGTCATTGAGTCCCTGCGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACCGCAATTTCAATTGGTCTTTCTTGTAAACTTCTGAGTGCAGATATGCAGCAGATAATTATAAATGGAACTTCAGAGGTTGAGTGCAGAAATCTCTTGGCTAATGCTAAAGCAAAGTATGGTGTGAAATATTCAAGTAGAGAACATCAAAATCTAAAGTGCAAAATTGATTCTAGTCATGGTGTCCCTGATATTCCCAAAGATACAAAATCCTTGAGCAAGCCCAAGTGGAATCCAGGAAAGGAAGAAGAAACTACTGCTCCATTGGCACTCATAATTGATGGAACCAGTTTGCTTTTCGACCTTGCAACTTCCTGTAGGGTTGTGATATGTTGCCGTGTTGCACCTTTGCAGAAAGCAGGAATTGTTGATCTAATAAAAAGCCGCACTGATGATCTGACATTAGCTATAGGTGATGGGGCAAATGATGTTTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCATCAGATTTTTCTATGGGACAATTCCAGTTCTTGAAAAAATTGCTTCTAGTTCATGGGCACTGGAATTATCAGCGTGTTGGTTATTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTGTTGATGTTATTCTGGTATATATTATGCACTGCTTTTTCTACAACTTCTGCATTGACAGATTGGAGTAGTGTATTATATTCAGTGATATACACATCTATCCCTACTATCATTGTTGGTGTTCTAGACAAAGACTTGAGTCATAGGACACTTTTGCAGTATCCAAAGTTGTATGGTGCAGGTCACCGACATGAGGCTTACAATATGCAATTATTTTGGATCACAATGATTGACACATTATGGCAGAGTCTTGTTCTCTTCTACATTCCTGTATGCGTCTATAAGGACAGCACACTTGATATATGGAGCATGGGCAGTTTATGGACGATTTCAGTTGTTATCCTTGTAAATGTGCACTTGGCTATGGACATTAACCAATGGGCATTAGTTAGTCATGTTGTGGTATGGGGATCAATAATCATTACATATGGTTGCGTGGTGGTATTAGATTCCATACCTGTCTTTCCTAATTACGGGACTATATATTATTTGGCAAGGTCCCCTACATATTGGATGACAATTTTGCTTATAATAATTGTTGCAATGCTACCTCGCTTTCTTTACAAAGTTGTTTGTCAAATCTTTTGTCCTTCGGATATCCAGATAGCTAGAGAAGCTGAGACAAAGAGAAAACAACATGATGATTTGAAGTCAAGGGTACCAGTTTCCAATTAA 3501 0.4019 MELNAQKIPPCEISHPRRNRVRPRSSLQFDDTILLHDDNACLIYVNDPIKTNENCEFAGNQIQTSRYNLLTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLTVLCVTAIKDAYEDWRKHMSDCNENNRECIVLQSAKFHPKKWKNIQAGDVLKISADEMIPADMVLLGTSDLSGIAYIQTMNLDGESNLKTRYAKQETTSVVLSDTCTASGVIRCEPPNRNIYEFTANMEFNGNKFPLNQSNIVLRGCMLKNTDWIVGVVVYAGQQTKAMLNSAASPSKRSKLESYMNRETVWLSVFLFIMCAVVALGMDFWLLRHKDQLDTLPYYRKTYFNNGPDKGKKYRYYGIPMETFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDKDMYDANSGSGLQCRSFNINEDLGQIRYVFSDKTGTLTENKMEFQRATVHGKKYGSSLLMDDKNKATTNGANQRWKLKSEIAVDSELMALLQKDLNRDERIVAHEFFLTLAACNTVIPIIKSSTFSSCGKGESNELIEGIDYQGESPDEQALVSAASAYGYTLFERTSGNIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVVRFPDNVVKVLVKGADTSMLSILAPENVGNNNRRHETQSHLSEYSMQGLRTLVVASRDLSDAELEEWQSMYEDASTSLTGRSTKLRQTATLIECNLKLLGATAIEDKLQEGVPEVIESLRQAGIKVWVLTGDKQETAISIGLSCKLLSADMQQIIINGTSEVECRNLLANAKAKYGVKYSSREHQNLKCKIDSSHGVPDIPKDTKSLSKPKWNPGKEEETTAPLALIIDGTSLLFDLATSCRVVICCRVAPLQKAGIVDLIKSRTDDLTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFSMGQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVLYSVIYTSIPTIIVGVLDKDLSHRTLLQYPKLYGAGHRHEAYNMQLFWITMIDTLWQSLVLFYIPVCVYKDSTLDIWSMGSLWTISVVILVNVHLAMDINQWALVSHVVVWGSIIITYGCVVVLDSIPVFPNYGTIYYLARSPTYWMTILLIIIVAMLPRFLYKVVCQIFCPSDIQIAREAETKRKQHDDLKSRVPVSN 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0015 1166 MobiDBLite consensus disorder prediction 796 817 - -
Aed4g0015 1166 Pfam Phospholipid-translocating P-type ATPase C-terminal 900 1140 IPR032630 -
Aed4g0015 1166 Pfam Phospholipid-translocating ATPase N-terminal 43 108 IPR032631 -
Aed4g0015 1166 SFLD Haloacid Dehalogenase 413 923 - -
Aed4g0015 1166 SUPERFAMILY Calcium ATPase, transmembrane domain M 58 1138 IPR023298 -
Aed4g0015 1166 Pfam E1-E2 ATPase 142 388 - -
Aed4g0015 1166 CDD P-type_ATPase_APLT_Dnf-like 59 1032 - -
Aed4g0015 1166 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 436 712 IPR023299 GO:0000166
Aed4g0015 1166 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 695 747 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed4g0015 1166 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 842 958 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed4g0015 1166 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 108 222 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed4g0015 1166 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1147 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Aed4g0015 1166 Gene3D - 543 678 IPR023299 GO:0000166
Aed4g0015 1166 ProSitePatterns E1-E2 ATPases phosphorylation site. 432 438 IPR018303 -
Aed4g0015 1166 MobiDBLite consensus disorder prediction 1 23 - -
Aed4g0015 1166 Gene3D - 695 912 IPR023214 -
Aed4g0015 1166 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 39 1162 - -
Aed4g0015 1166 SUPERFAMILY Calcium ATPase, transduction domain A 140 282 IPR008250 -
Aed4g0015 1166 Gene3D - 117 286 - -
Aed4g0015 1166 SUPERFAMILY HAD-like 418 916 IPR036412 -
Aed4g0015 1166 SFLD p-type atpase 413 923 IPR044492 -
Aed4g0015 1166 PRINTS P-type cation-transporting ATPase superfamily signature 872 891 - -
Aed4g0015 1166 PRINTS P-type cation-transporting ATPase superfamily signature 430 444 - -
Aed4g0015 1166 MobiDBLite consensus disorder prediction 796 816 - -
Aed4g0015 1166 Pfam Cation transport ATPase (P-type) 545 620 - -
Aed4g0015 1166 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0015 Aed-Chr4 87205 94802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0015 35 1149 Primary Pumps ATPases AT5G04930 55.280 0.0 1257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0015 K14802 - gmx:100788740 2095.47