Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0001 ATGTTTATCTCTGGCCCTGGCACGGCCACAGACACACTTAGTCCTACAGAGCAGGAAACCATGGGAGGATTAGGAATATCAGCACTTAATTTGACCCCATTTACATTTGCTATCAGTACTATGATTGCTATGGTGCTAATATGGTGGTTCTGGAATGCGTTCAACTGGGTGTGGCTGAGACCAAAGAGGATAGAGAGGCGTCTCAAGGAGCAGGGTATCCTAGGCAACTCCTACCGCCCTTTGGTTGGAGACATCAGAGATATGGTTAAAATGATTAAGGTAGCCAAATCCAAACCTATGGATCCTCACTCTAATGACATTGCACCCCGTGTATTGCCTTACGTTGTCCACACCATCGCTAAATACGGTAAGAGTTCATTTATGTGGCTTGGTCCAAGACCAAGGGTATTCATCTTGGATCCAGACAAATTCAAAGAAATGGCGACTAAGGTCTATGATTTTCAGAAGCCTGACACTAGTCCACTTTTCAAGCTTCTAGCATCAGGATTTGCAAATTATGATGGCGACAAGTGGGCTAAACACAGAAAGATCGTGAGTCCAGCATTCAATCTAGAGAAAATGAAGCTCTTGGTACCGATATTTTGCCAGAGTTGCGATGATTTGATCAACCAATGGGAGAGTGTGTTATCTTCATCTAATGGGTCTTGTGAGTTAGATGTGTGGCCTTTTGTCCAAAACGTGTCAAGCGACGTCCTTGCTCGTGCAGGCTTTGGAAGTAGCTATGAAGAAGGAAAAAAAGTATTCGAACTTCAAAGGGAAATGCTCCAACATACAATGACACTTTTTAAGTTTGCTTTCATTCCAGGTTACAGGTTTCTGCCAACGCGTACCAACAGGAGGATGAAGGCAATCGACAAGGAAATACGAGAATCAGTTATGGGAATCATCAACCGAAGATTAAAAGCAATCAAAGCAGGGGAGCCTACTAACAATGACTTGTTAGGCGTACTCTTGGAATCAAATTACAAGGAATCTGAAAAAAGTAGTGGTGGAGGAATGAGTTTAAGGGAAGTAGTGGAAGAAGTCAAGCTATTTTACTTGGCAGGGCAGGAAGCGAATGCAGAATTGCTGGTCTGGACTTTGTTATTATTAAGCAGGCATCCTGATTGGCAAGAAAAGGCTAGGAAGGAGGTTTTCCAAGTGTTCGGTAATGACAAGCCAGATTATGATAGGCTTGGTCAACTTAAAATTGTGTCAATGATTCTACAGGAGAGTCTCAGATTATATCCCCCAGTGGTTATGTTCGCGCGGTATCTTCGAAAAGATACAAAACTTGGAGACCTTACAATTCCCGCAGGAGTGGAGCTTGTAGTACCTGTGTCAATGCTACACCAGGATAAGGAGTTTTGGGGAGATGATGCCGGGGAATTCAACCCAGAAAGATTCTCGGAAGGAGTCTCAAAGGCAACAAAAGGCAAGCTCGCATACTTGCCATTTGGATGGGGTCCTCGACTTTGCATTGGACAAAACTTCGGCTTGTTAGAAGCAAAAATAGCCGTGTCAATGATCCTGCAACATTTCTCGCTCGAGTTTTCCCCATCCTATGCTCATGCCCCGTCCTTTATTATCACTCTACAGCCTGAGCGTGGGGCTCATCTCATTTTACACAAACTGTAG 1638 0.4396 MFISGPGTATDTLSPTEQETMGGLGISALNLTPFTFAISTMIAMVLIWWFWNAFNWVWLRPKRIERRLKEQGILGNSYRPLVGDIRDMVKMIKVAKSKPMDPHSNDIAPRVLPYVVHTIAKYGKSSFMWLGPRPRVFILDPDKFKEMATKVYDFQKPDTSPLFKLLASGFANYDGDKWAKHRKIVSPAFNLEKMKLLVPIFCQSCDDLINQWESVLSSSNGSCELDVWPFVQNVSSDVLARAGFGSSYEEGKKVFELQREMLQHTMTLFKFAFIPGYRFLPTRTNRRMKAIDKEIRESVMGIINRRLKAIKAGEPTNNDLLGVLLESNYKESEKSSGGGMSLREVVEEVKLFYLAGQEANAELLVWTLLLLSRHPDWQEKARKEVFQVFGNDKPDYDRLGQLKIVSMILQESLRLYPPVVMFARYLRKDTKLGDLTIPAGVELVVPVSMLHQDKEFWGDDAGEFNPERFSEGVSKATKGKLAYLPFGWGPRLCIGQNFGLLEAKIAVSMILQHFSLEFSPSYAHAPSFIITLQPERGAHLILHKL 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0001 545 PRINTS E-class P450 group I signature 483 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0001 545 PRINTS E-class P450 group I signature 119 138 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0001 545 PRINTS E-class P450 group I signature 364 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0001 545 PRINTS E-class P450 group I signature 234 252 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0001 545 PRINTS E-class P450 group I signature 493 516 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0001 545 PANTHER CYTOCHROME P450 FAMILY MEMBER 14 543 - -
Aed4g0001 545 SUPERFAMILY Cytochrome P450 110 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0001 545 Pfam Cytochrome P450 120 529 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0001 545 Gene3D Cytochrome P450 40 545 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0001 545 PRINTS P450 superfamily signature 484 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0001 545 PRINTS P450 superfamily signature 407 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0001 545 PRINTS P450 superfamily signature 493 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0001 545 PRINTS P450 superfamily signature 355 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g0001 545 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 14 543 - -
Aed4g0001 545 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 486 495 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0001 Aed-Chr4 2183 5221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0001 22 545 Cytochrome P450 AT3G14690 51.908 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0001 - K24179 gmx:100801959 987.252