Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2705 ATGGGCAACACATGCCGCGGATCTTTGAAAGGGAAATATATTCAGGGCTTCAGCCAGCGCGAAGATCATTCCAAGCGCACCACCCATTCTGATCCCTCCTCCGACTCCCAACACCACTCAACCAAGCAAAATCTCAATTCTGCAGAAAACAACAAAAACAACAACAACAATCCACCACCCTTCAACGCCAAGAGAGAAGCCATCATGCGCCGCGGCCTTGACAACCAAGCATATTATGTCTTGGGCCATAAGACTCCCAACATTCGTGATCTATACACTCTTGGCCGTAAATTAGGACAGGGGCAATTCGGCACCACTTATTTATGCACCGAGAATTCTACCTCCATTGAATATGCCTGCAAATCCATCTCCAAAAGAAAGTTGATTTCCAAGGAGGACGTCGAGGACGTTAGGAGGGAAATTCAGATAATGCATCATTTAGCTGGTCACAAGAACATTGTCACCATCAAGGGTGCTTATGAGGATCCAGTCTATGTTCATATTGTCATGGAGCTTTGTTCTGGGGGTGAGTTGTTTGACCGCATCATCCAGAGGGGCCACTATACCGAGAGGAAAGCTGCAGAGTTGACCAAAATTATTGTTGGGGTTGTTGAGGCTTGCCATTCCCTCGGGGTTATGCATAGAGATCTCAAGCCTGAAAACTTTTTGTTGGTCAACAAAGATGATGATTTCTCTCTTAAAGCAATTGACTTTGGCCTCTCCGTTTTCTTCAAACCCGGTCAAGTTTTCTCTGATGTAGTTGGCAGCCCATACTATGTTGCTCCTGAGGTTCTCCTCAAGCATTATGGGCCTGAAGCAGATGTGTGGACGGCGGGTGTCATACTATACATATTGCTTAGTGGTGTGCCGCCATTTTGGGCAGAGACCCAGCAGGGTATATTTGATGCAGTATTGAAGGGACATATAGATTTCGACTCAGATCCTTGGCCTCTAATATCTGACAGTGGAAAAGATTTGATTAGAAAGATGCTGTGTTCTCAGCCTAAAGAACGGTTGACTGCTCATCAAGTGTTATGTCATCCTTGGATATGTGAAAATGGAGTTGCCCCTGACAGGTCACTGGACCCTGCTGTTCTTTCTCGTCTCAAACAGTTTTCTGCAATGAATAAGCTAAAGAAGATGGCTCTGCGAGTGATCGCTGAAAGTCTATCCGAAGAGGAGATTGCTGGTTTGAGAGAAATGTTTCAGGCTATGGATACTGATAATAGTGGGGCAATCACTTTTGATGAACTCAAAGCTGGTCTAAGAAGATATGGGTCTACCCTTAAGGATATTGAAATACGCGATCTTATGGAAGCGGCTGATGTGGACAAAAGTGGGACCATAGATTACGGGGAGTTTATTGCTGCAACAGTTCATCTCAACAAACTAGAGCGCGAAGAACATCTTATTGCAGCATTCCAATATTTTGACAAGGATGGTAGTGGTTACATTACAGTTGATGAACTTCAACAAGCTTGTGCAGAACATAACATGACTGATGCTTTTCTTGAAGATATTATAAGAGAAGTTGATCAAGATAATGATGGAAGGATTGATTATGGTGAATTTGCTGCCATGATGCAAAAAGGCAATGTTGGAATTGGTAGGAGGACTATGCGCAACAGTCTGAATTTAAGCATGAGAGATGCACCAAGTGCTCAATAG 1668 0.4394 MGNTCRGSLKGKYIQGFSQREDHSKRTTHSDPSSDSQHHSTKQNLNSAENNKNNNNNPPPFNAKREAIMRRGLDNQAYYVLGHKTPNIRDLYTLGRKLGQGQFGTTYLCTENSTSIEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPVYVHIVMELCSGGELFDRIIQRGHYTERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQVFSDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLISDSGKDLIRKMLCSQPKERLTAHQVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQAMDTDNSGAITFDELKAGLRRYGSTLKDIEIRDLMEAADVDKSGTIDYGEFIAATVHLNKLEREEHLIAAFQYFDKDGSGYITVDELQQACAEHNMTDAFLEDIIREVDQDNDGRIDYGEFAAMMQKGNVGIGRRTMRNSLNLSMRDAPSAQ 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2705 555 Gene3D Phosphorylase Kinase; domain 1 94 177 - -
Aed3g2705 555 ProSiteProfiles EF-hand calcium-binding domain profile. 465 500 IPR002048 GO:0005509
Aed3g2705 555 ProSiteProfiles EF-hand calcium-binding domain profile. 429 464 IPR002048 GO:0005509
Aed3g2705 555 ProSitePatterns EF-hand calcium-binding domain. 406 418 IPR018247 -
Aed3g2705 555 Pfam Protein kinase domain 92 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2705 555 PANTHER SERINE/THREONINE-PROTEIN KINASE 47 540 - -
Aed3g2705 555 ProSiteProfiles EF-hand calcium-binding domain profile. 393 428 IPR002048 GO:0005509
Aed3g2705 555 ProSiteProfiles Protein kinase domain profile. 92 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2705 555 ProSiteProfiles EF-hand calcium-binding domain profile. 501 534 IPR002048 GO:0005509
Aed3g2705 555 MobiDBLite consensus disorder prediction 1 63 - -
Aed3g2705 555 MobiDBLite consensus disorder prediction 16 36 - -
Aed3g2705 555 MobiDBLite consensus disorder prediction 37 61 - -
Aed3g2705 555 ProSitePatterns EF-hand calcium-binding domain. 512 524 IPR018247 -
Aed3g2705 555 ProSitePatterns EF-hand calcium-binding domain. 478 490 IPR018247 -
Aed3g2705 555 Gene3D Transferase(Phosphotransferase) domain 1 178 359 - -
Aed3g2705 555 SMART efh_1 503 531 IPR002048 GO:0005509
Aed3g2705 555 SMART efh_1 397 425 IPR002048 GO:0005509
Aed3g2705 555 SMART efh_1 433 461 IPR002048 GO:0005509
Aed3g2705 555 SMART efh_1 469 497 IPR002048 GO:0005509
Aed3g2705 555 Pfam EF-hand domain pair 398 458 IPR002048 GO:0005509
Aed3g2705 555 Pfam EF-hand domain pair 468 529 IPR002048 GO:0005509
Aed3g2705 555 SUPERFAMILY EF-hand 374 531 IPR011992 -
Aed3g2705 555 SUPERFAMILY Protein kinase-like (PK-like) 76 374 IPR011009 -
Aed3g2705 555 Gene3D - 360 532 - -
Aed3g2705 555 CDD STKc_CAMK 92 349 - -
Aed3g2705 555 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 4 47 540 - -
Aed3g2705 555 ProSitePatterns Protein kinases ATP-binding region signature. 98 121 IPR017441 GO:0005524
Aed3g2705 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Aed3g2705 555 ProSitePatterns EF-hand calcium-binding domain. 442 454 IPR018247 -
Aed3g2705 555 SMART serkin_6 92 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2705 Aed-Chr3 28674950 28681814 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2705 1 551 EF-hand Containing Proteins AT2G17290 82.759 0.0 952
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aed3g2705 Pkinase 1.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2705 K13412 - gmx:100778173 1044.26