Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2702 ATGAAACGTCAAAATCTGGTGCGCATTCATGTCAAAATGGCCCTGTGCTCAGACACCGTTCCACTTCCACTTGTATTGTGTTGTGGGGGTGGTGGTCCTCTTCCACTTCCGGGTTTATGCCTTCATTCTTCATTGTCTCCCGCTATCTCTTCACTCACTCCTTGCAAATTGCAATTGAACACATCAAGACATGATGATGATTTCGTCCAGATCAAAATCGGTGCCATATTCACATTAAAAACTATAAACGGACGAGTTTCCAAAATTGGCATCCAAGCTGCTGAGAAAGATGTGAATTCCGATCCTCGCATCCTGGGAGGGCGTAAATTGTCCATAACTATCCATGATTCCAACTTCAGTGGCTTTCTTGGCTTTATAGGGGCCCTCAAGTTCTTGATGACCGACACAGTAGCTATAATTGGTCCACAAAATTCAGTAACGGCCCATGTGCTTTCGCATCTTGCAAATGAGCTCCATGTCCCCCTACTCTCCTTCACGGCTCTGGATCCCACCCTAACACCTCTCCAGTATCCTTATTTTGTCCAAACAGCACCCAGCGACCAGTTCCAGATGACTGCAGTTGCGGACATAATTAGTTATTTTGGTTGGAGAGAAGTCATAGCAGTGTTCAGTGATGATGATCAGAGTCGAAATGGGATAACTGTTTTGGGGGATAAACTTGCAGAGAGACGCTGTAAGTTTTCTTACAAAGCAGCACTGCCTCCTGATCCAACCGCCACTCCAACCCATGTTACTAGTCAGTTAGTCAAGATTAAGAGTATGGAGTCTCGAATAATCGTTTTAAACACCTATTCCCAGACCGGCCTCTTGGTTTTTGAGATGGCTCATCAACTAGGAATGATGACCAAAGGGTATGTCTGGATAGCTACTTCTTGGTTATCCACTGTTTTAGATTCAACTTCCCCTTCAAATGCCTCATTTCTTCAAGGAGTTATTACCTTTCGCCCTCACACCCTTCAATCCACAAAAAGACAGGCATTTATCTCAAGGTGGAAGCACTTAAGTAATGCCTCAATTGGCTTAAATCCATACGGCCTCTATGCATATGACTCTGTTTGGATGATTGCTCAGGCACTCAAATTGTTTTTTGATCGGAATGGTTCCATTTCATTCTCTAATAATAATAATACAGATTTAAGTGGTAGAGAAGAGACGACTACTATGGGTTTCGGTGCTTTGAGCGTTTTTGATGGAGGGAAGCAGTTACTTGATAACATATTGCGCGTTAATATGACTGGGTTGACTGGACCTATTCAATTTGGTTCAGATAGATCTCCTCTAAATCCATCATATGACATCCTTAATGTAATTGGTTATAGGAGTATCCGTATCGGTTACTGGTCCAATTACTCTGGCCTCTCTGTAATAACCCCTGAGAAACTTCACGCAAAGCCTGCCAATCGTTCAATTTCAAGCCAGCATCTAAACCATGTCATATGGCCCGGAAATACAGCAGAAAGGCCTCGTGGATGGGTTTTCCCAAATAATGGGAGGCAACTCAGAATTGGAGTTCCCAACAGAGTCAGTTATCGAGACATGGTCTCACAAATAAATGGCACCAATGCAGTTCAAGGATATTGCATAGATATATTCCTAGCTGCCGTTAAATTGCTTCCATACCCAGTTCAATATAACTTCATTCTGTTTGGAGATGGACACAAGAACCCAAGCTACTACGATCTTGTCAACATGATTACTTCTGATGTTTTTGATGCTGCTGTAGGTGACATTGCAATTGTCACTGACCGAACAAAGATTGTGGATTTTACTCAACCATATATAGAGTCGGGGCTAGTTGTGGTTGCTCCAGTAAAAAAATTGAAGTCAAATGCTTGGGCTTTCTTGCGACCATTTACTCCACAGATGTGGGGTGTCACTGCATTTATTTTCCTTTTTGTTGGAGCAGTGGTGTGGTTTCTTGAACATAGAACAAACGATGAGTTCCGGGGGTCACCGAAGGAACAGATAGTTACAGTTCTTTGGTTTAGTTTCTCAACCATGTTCTTTGCGCACAGTAAGTCCACCCACCATTTTGACAGATCATGTCCTATTCTAATTCTAGTGTGTATTTGTTACTTGAGTAGAAACAAGAAACAGATGAGCTTCCTTGTTGTTTCAGGAGAAAACACAGTTAGTCCACTTGGTCGAGTTGTGTTGATAATCTGGCTTTTTGTGGTTCTGATAATAAATTCAAGCTACACAGCAAGCTTGACATCGATTCTCACTGTGCAGCAGCTGTCCTCACCCATAACAGGAATTGATAGCTTGATATCCAGCAGCGAACGTATAGGGTTCCAAGTTGGCTCATTTGCTGCAAACTATCTGACTGAGCAACTCAACATCCCCAAACATAGACTTGTTCCTCTTGGCTCACCAGAAGAATATGCTGTTGCCCTTGAAAGGGGAACTGTGGCAGCTGTGGTGGATGAACGACCATATGTAGAACTCTTCCTTTCAAACCACTGCCAATTCTCAATTAGGGGCCATGAGTTCACCAAAAGTGGATGGGGATTTGCATTCCCAAGAGACTCTTCATTTGCAATTGATATGTCAACTGCGATTCTAACCCTATCTGAGAATGGTGAGCTTCAGAGGATCCATGAAGAGTGGCTTTCAGAAAAGGCTTGTGGTTTTCACACTAGCAGTGAGGATGAACAACTTCAATTAAATAGCTTTCGGGGCCTGTTTCTAATCTGTGGAATAACATGTTTCCTGGCGCTTATTATCTACTTCTTATCAATGGTACGCCAATTCAGTAAAAAATCCCCTCAAAAAGTTGGTCCTTCTAATCGTTGCATCCAGACATTTCTACATTTTGTAGACGAAAAAGAAGACGTATCACCCAAGAAGTTAAAAAGAAAACTTGAGCATATCCAAGAGACTACAAGTGGACATTTCCCAAGAGCCTCCTTGCGGTTAAGTTAA 2946 0.425 MKRQNLVRIHVKMALCSDTVPLPLVLCCGGGGPLPLPGLCLHSSLSPAISSLTPCKLQLNTSRHDDDFVQIKIGAIFTLKTINGRVSKIGIQAAEKDVNSDPRILGGRKLSITIHDSNFSGFLGFIGALKFLMTDTVAIIGPQNSVTAHVLSHLANELHVPLLSFTALDPTLTPLQYPYFVQTAPSDQFQMTAVADIISYFGWREVIAVFSDDDQSRNGITVLGDKLAERRCKFSYKAALPPDPTATPTHVTSQLVKIKSMESRIIVLNTYSQTGLLVFEMAHQLGMMTKGYVWIATSWLSTVLDSTSPSNASFLQGVITFRPHTLQSTKRQAFISRWKHLSNASIGLNPYGLYAYDSVWMIAQALKLFFDRNGSISFSNNNNTDLSGREETTTMGFGALSVFDGGKQLLDNILRVNMTGLTGPIQFGSDRSPLNPSYDILNVIGYRSIRIGYWSNYSGLSVITPEKLHAKPANRSISSQHLNHVIWPGNTAERPRGWVFPNNGRQLRIGVPNRVSYRDMVSQINGTNAVQGYCIDIFLAAVKLLPYPVQYNFILFGDGHKNPSYYDLVNMITSDVFDAAVGDIAIVTDRTKIVDFTQPYIESGLVVVAPVKKLKSNAWAFLRPFTPQMWGVTAFIFLFVGAVVWFLEHRTNDEFRGSPKEQIVTVLWFSFSTMFFAHSKSTHHFDRSCPILILVCICYLSRNKKQMSFLVVSGENTVSPLGRVVLIIWLFVVLIINSSYTASLTSILTVQQLSSPITGIDSLISSSERIGFQVGSFAANYLTEQLNIPKHRLVPLGSPEEYAVALERGTVAAVVDERPYVELFLSNHCQFSIRGHEFTKSGWGFAFPRDSSFAIDMSTAILTLSENGELQRIHEEWLSEKACGFHTSSEDEQLQLNSFRGLFLICGITCFLALIIYFLSMVRQFSKKSPQKVGPSNRCIQTFLHFVDEKEDVSPKKLKRKLEHIQETTSGHFPRASLRLS 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2702 981 CDD PBP1_GABAb_receptor_plant 72 462 IPR044440 -
Aed3g2702 981 Pfam Bacterial extracellular solute-binding proteins, family 3 525 879 IPR001638 -
Aed3g2702 981 Pfam Receptor family ligand binding region 91 443 IPR001828 -
Aed3g2702 981 Gene3D - 186 460 - -
Aed3g2702 981 CDD GluR_Plant 505 878 - -
Aed3g2702 981 SUPERFAMILY Periplasmic binding protein-like II 484 880 - -
Aed3g2702 981 Gene3D - 91 435 - -
Aed3g2702 981 SMART GluR_14 508 880 IPR001320 GO:0015276|GO:0016020
Aed3g2702 981 PANTHER GLUTAMATE RECEPTOR 3.3 70 959 - -
Aed3g2702 981 Gene3D - 498 617 - -
Aed3g2702 981 Gene3D - 813 840 - -
Aed3g2702 981 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 70 959 - -
Aed3g2702 981 Pfam Ligand-gated ion channel 880 909 IPR001320 GO:0015276|GO:0016020
Aed3g2702 981 SUPERFAMILY Periplasmic binding protein-like I 71 499 IPR028082 -
Aed3g2702 981 PIRSF IGluLR_plant 42 700 IPR017103 -
Aed3g2702 981 PIRSF IGluLR_plant 705 975 IPR017103 -
Aed3g2702 981 Gene3D - 618 787 - -
Aed3g2702 981 Gene3D - 841 877 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2702 Aed-Chr3 28664250 28667700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2702 71 961 Ion Channels AT2G17260 59.141 0.0 1096
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2702 K05387 - gmx:100793969 1316.6