Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2700 ATGGGAAATTGCTGGGGTTCTCCACCGCACACCCCAACCCCAACCCCAACCCCAACAACTACCGGTAACCTTAGTTCAGAGCCGATACAGTGCTTGGGGAGGGGGGGTTTTGGAAAAGTCTTCAAGGGTTGGCTTGAAGAAAAGGCCACCTCCAAGACTGGAAGCGGAACAGTCATTGCAGTCAAAAAACTCAACTCTGAAAGCTTACAAGGACTTGAGGAGTGGCAGTCCGAAGTAAATTTTCTAGGACGACTTTCTCATCCTAATCTTGTTAAGCTGTTGGGATACTGTTTGGAGGAAACAGAGCTTCTTCTGGTCTATGAATTCATGCAAAAGGGTAGTTTGGAAAACCATCTATTTGGAAGGGGTTCTGCCGTTCAACCACTTCCTTGGGATATCAGGCTTAAGATAGCAATTGGAGCAGCTCGGGGCCTCGCATTCTTGCATACATCTGAGAAAGTAATTTACAGAGACTTCAAGGCCTCCAATATTTTGCTCGATGGGTCCTATAATGCAAAGATATCAGATTTTGGCTTGGCAAAACTGGGTCCTTCAGCTAGTCAATCCCATGTGACAACAAGGGTGATGGGCACATATGGCTATGCAGCTCCTGAGTATGTGGCCACAGGGCATCTATATGTAAAGAGTGATGTATATGGATTTGGAGTTGTTTTGGTGGAAATACTAACTGGCCTACGAGCACTTGATGCCAACCGTCCAAGTGGGCAACATAGTCTAACAGAGTGGGTGAAACCATACTTGCATGACAGAAGGAAATTGAAGGGCATTATGGATTCTCGATTGGAAGGAAAATTTCCATTGAAAGCTGCATTCCGTATAGCTCAGCTTTCTTTGAAATGTCTTGCATCTGAGCCCAAACAGCGGCCATCAATGAAGGAAGTTTTGGAGAATTTGGAGCGAATTCAAGCTGCCAATGAGAAACCTGTGGAGCCTAAATTCCGTTCTACTCATGCCCGTCAAGGTCACCAGGCTGTGCACCATCGTTCTCCACGTCAGGACGGTAGTTACTAA 1032 0.4612 MGNCWGSPPHTPTPTPTPTTTGNLSSEPIQCLGRGGFGKVFKGWLEEKATSKTGSGTVIAVKKLNSESLQGLEEWQSEVNFLGRLSHPNLVKLLGYCLEETELLLVYEFMQKGSLENHLFGRGSAVQPLPWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGSYNAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDANRPSGQHSLTEWVKPYLHDRRKLKGIMDSRLEGKFPLKAAFRIAQLSLKCLASEPKQRPSMKEVLENLERIQAANEKPVEPKFRSTHARQGHQAVHHRSPRQDGSY 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2700 343 Gene3D Phosphorylase Kinase; domain 1 32 110 - -
Aed3g2700 343 CDD STKc_IRAK 32 308 - -
Aed3g2700 343 PIRSF TyrPK_CSF1-R 123 232 - -
Aed3g2700 343 PIRSF TyrPK_CSF1-R 268 342 - -
Aed3g2700 343 PIRSF TyrPK_CSF1-R 29 128 - -
Aed3g2700 343 Pfam Protein tyrosine and serine/threonine kinase 30 305 IPR001245 GO:0004672|GO:0006468
Aed3g2700 343 Gene3D Transferase(Phosphotransferase) domain 1 111 330 - -
Aed3g2700 343 PANTHER OS01G0588500 PROTEIN-RELATED 21 336 - -
Aed3g2700 343 SUPERFAMILY Protein kinase-like (PK-like) 26 307 IPR011009 -
Aed3g2700 343 MobiDBLite consensus disorder prediction 1 25 - -
Aed3g2700 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Aed3g2700 343 MobiDBLite consensus disorder prediction 305 324 - -
Aed3g2700 343 ProSiteProfiles Protein kinase domain profile. 26 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2700 343 ProSitePatterns Protein kinases ATP-binding region signature. 32 63 IPR017441 GO:0005524
Aed3g2700 343 MobiDBLite consensus disorder prediction 305 343 - -
Aed3g2700 343 PANTHER BNAA09G08980D PROTEIN 21 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2700 Aed-Chr3 28639581 28644359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2700 21 313 Receptor kinase-like Gene Family AT4G02010 49.832 6.76e-93 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed3g2700 PK_Tyr_Ser-Thr 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2700 - - gmx:100305417 602.823