Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2687 ATGATGGTCTTTGTGGTTGTTGTTGAGATTCCGAGATTGGTAAGTGGTGAGTGTAAGTGGGAAGAAGAAGAGAAAGGCGGTGACAAGGGTTTGGCGCGGACATATAAAATAGCAGCATTGTTTTCCATATTGGTAGTAAGTGCAATAGGGAGGGACTTGTTCTTCATCGTGAAGGCCTTTGAAAAATTAACATCTCCATGTCTCCCTGATCATCCCTGGTCCGATTTTCCCTTCACCGGATTTGTGGCAATGCTAGCCGCTATTGGAACCCTTATGGTTGATTCCATCGTAACCGCATATTTTAAAAACAAGAACAAGCAGGATCGAGTTGCTGCTGGTGACGAAGAAGAGCATTATCATGACGTGTTGGACCTGGAGTTGGAGTTGTGGATTGTGGTGCATTTAGTGATAATAGGGATCTCTCTGGGTGCATCTGAAAGTCCTAAAACGATAAGGCCTCTTATTGCTGCTTTAACTTTCCACCAATTTTTTGAAGGGATGGGACTCGGTGGTTGCATCTCACAGTTGTATTTTGTACTGCGATAA 546 0.4377 MMVFVVVVEIPRLVSGECKWEEEEKGGDKGLARTYKIAALFSILVVSAIGRDLFFIVKAFEKLTSPCLPDHPWSDFPFTGFVAMLAAIGTLMVDSIVTAYFKNKNKQDRVAAGDEEEHYHDVLDLELELWIVVHLVIIGISLGASESPKTIRPLIAALTFHQFFEGMGLGGCISQLYFVLR 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2687 181 PANTHER ZINC/IRON TRANSPORTER 57 117 - -
Aed3g2687 181 Pfam ZIP Zinc transporter 116 176 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Aed3g2687 181 PANTHER ZINC/IRON TRANSPORTER 124 178 - -
Aed3g2687 181 PANTHER ZINC TRANSPORTER 1 57 117 - -
Aed3g2687 181 PANTHER ZINC TRANSPORTER 1 124 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2687 Aed-Chr3 28503400 28505281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2687 17 176 Inorganic Solute Cotransporters AT1G05300 37.931 1.92e-39 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2687 K14709 - sind:105178590 177.948